RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A IES6P32617 166 aa2.54□□□□□ -2
SUS1YBR111W-A SPO23P33757 523 aa2.54□□□□□ -2
SUS1YBR111W-A MRP21P38175 177 aa2.54□□□□□ -2
SUS1YBR111W-A YSW1P38280 609 aa2.54□□□□□ -2
SUS1YBR111W-A DED81P38707 554 aaKnown RBP2.54□□□□□ -2
SUS1YBR111W-A RPL6AQ02326 176 aaKnown RBP2.54□□□□□ -2
SUS1YBR111W-A RCF1Q03713 159 aa2.54□□□□□ -2
SUS1YBR111W-A YFH1Q07540 174 aa2.54□□□□□ -2
SUS1YBR111W-A PFS1P38872 237 aa2.53□□□□□ -2
SUS1YBR111W-A TIM17P39515 158 aa2.53□□□□□ -2
SUS1YBR111W-A SEC27P41811 889 aaKnown RBP2.53□□□□□ -2
SUS1YBR111W-A COX4P04037 155 aa2.52□□□□□ -2.01
SUS1YBR111W-A PRB1P09232 635 aa2.52□□□□□ -2.01
SUS1YBR111W-A SCH9P11792 824 aaKnown RBP2.52□□□□□ -2.01
SUS1YBR111W-A ZRC1P20107 442 aa2.52□□□□□ -2.01
SUS1YBR111W-A MSP1P28737 362 aa2.52□□□□□ -2.01
SUS1YBR111W-A PSO2P30620 661 aa2.52□□□□□ -2.01
SUS1YBR111W-A AIP1P46680 615 aaKnown RBP2.52□□□□□ -2.01
SUS1YBR111W-A TRF5P48561 642 aaKnown RBP2.52□□□□□ -2.01
SUS1YBR111W-A REX2P54964 269 aaKnown RBP2.52□□□□□ -2.01
SUS1YBR111W-A MRPS16Q02608 121 aa2.52□□□□□ -2.01
SUS1YBR111W-A YHC1Q05900 231 aaKnown RBP2.52□□□□□ -2.01
SUS1YBR111W-A GAT3Q07928 141 aa2.52□□□□□ -2.01
SUS1YBR111W-A DNL4Q08387 944 aaPredicted RBP2.52□□□□□ -2.01
SUS1YBR111W-A TFB5Q3E7C1 72 aaPredicted RBP2.52□□□□□ -2.01
SUS1YBR111W-A DAP2P18962 818 aa2.51□□□□□ -2.01
SUS1YBR111W-A MRPL8P22353 238 aa2.51□□□□□ -2.01
SUS1YBR111W-A CHA1P25379 360 aaKnown RBP2.51□□□□□ -2.01
SUS1YBR111W-A DPH2P32461 534 aa2.51□□□□□ -2.01
SUS1YBR111W-A GDT1P38301 280 aaPredicted RBP2.51□□□□□ -2.01
SUS1YBR111W-A EOS1P53938 366 aa2.51□□□□□ -2.01
SUS1YBR111W-A YPL107WQ02873 248 aa2.51□□□□□ -2.01
SUS1YBR111W-A YPR078CQ06813 372 aa2.51□□□□□ -2.01
SUS1YBR111W-A PEX27Q08580 376 aa2.51□□□□□ -2.01
SUS1YBR111W-A FRE6Q12473 712 aa2.51□□□□□ -2.01
SUS1YBR111W-A SKS1Q12505 502 aa2.51□□□□□ -2.01
SUS1YBR111W-A PSK1P31374 1356 aa2.5□□□□□ -2.01
SUS1YBR111W-A RPS18AP0CX55 146 aaKnown RBP2.5□□□□□ -2.01
SUS1YBR111W-A RPS18BP0CX56 146 aaPredicted RBP2.5□□□□□ -2.01
SUS1YBR111W-A ADH5P38113 351 aaKnown RBP2.5□□□□□ -2.01
SUS1YBR111W-A YBL028CP38202 106 aa2.5□□□□□ -2.01
SUS1YBR111W-A LSM12P38828 187 aaKnown RBP2.5□□□□□ -2.01
SUS1YBR111W-A ALD5P40047 520 aaKnown RBP2.5□□□□□ -2.01
SUS1YBR111W-A IGD1P43598 195 aa2.5□□□□□ -2.01
SUS1YBR111W-A KEG1P43614 200 aa2.5□□□□□ -2.01
SUS1YBR111W-A CIN2P46670 268 aa2.5□□□□□ -2.01
SUS1YBR111W-A CTK3P46963 296 aaPredicted RBP2.5□□□□□ -2.01
SUS1YBR111W-A PGU1P47180 361 aa2.5□□□□□ -2.01
SUS1YBR111W-A RET3P53600 189 aa2.5□□□□□ -2.01
SUS1YBR111W-A YMR010WQ03687 405 aa2.5□□□□□ -2.01
SUS1YBR111W-A MCT1Q12283 360 aa2.5□□□□□ -2.01
SUS1YBR111W-A HMS1Q12398 434 aa2.5□□□□□ -2.01
SUS1YBR111W-A FAB1P34756 2278 aa2.49□□□□□ -2.01
SUS1YBR111W-A UBA1P22515 1024 aaKnown RBP2.49□□□□□ -2.01
SUS1YBR111W-A CMK2P22517 447 aa2.49□□□□□ -2.01
SUS1YBR111W-A DBR1P24309 405 aaKnown RBP2.49□□□□□ -2.01
SUS1YBR111W-A GIT1P25346 518 aa2.49□□□□□ -2.01
SUS1YBR111W-A RPL16AP26784 199 aaKnown RBP2.49□□□□□ -2.01
SUS1YBR111W-A FAA1P30624 700 aaKnown RBP2.49□□□□□ -2.01
SUS1YBR111W-A DEP1P31385 405 aa2.49□□□□□ -2.01
SUS1YBR111W-A MSK1P32048 576 aa2.49□□□□□ -2.01
SUS1YBR111W-A SSE1P32589 693 aaKnown RBP2.49□□□□□ -2.01
SUS1YBR111W-A DAD2P36162 133 aa2.49□□□□□ -2.01
SUS1YBR111W-A GPI18P38211 433 aa2.49□□□□□ -2.01
SUS1YBR111W-A HEM14P40012 539 aa2.49□□□□□ -2.01
SUS1YBR111W-A SEC9P40357 651 aa2.49□□□□□ -2.01
SUS1YBR111W-A LYS12P40495 371 aaKnown RBP2.49□□□□□ -2.01
SUS1YBR111W-A SNL1P40548 159 aa2.49□□□□□ -2.01
SUS1YBR111W-A YPS5P53057 165 aa2.49□□□□□ -2.01
SUS1YBR111W-A ENT5Q03769 411 aaKnown RBP2.49□□□□□ -2.01
SUS1YBR111W-A MSC3Q05812 728 aa2.49□□□□□ -2.01
SUS1YBR111W-A SHS1Q07657 551 aa2.49□□□□□ -2.01
SUS1YBR111W-A YOR338WQ99326 363 aa2.49□□□□□ -2.01
SUS1YBR111W-A STE7P06784 515 aa2.48□□□□□ -2.01
SUS1YBR111W-A MID2P36027 376 aa2.48□□□□□ -2.01
SUS1YBR111W-A WSC4P38739 605 aa2.48□□□□□ -2.01
SUS1YBR111W-A APE4P38821 490 aa2.48□□□□□ -2.01
SUS1YBR111W-A MKC7P53379 596 aa2.48□□□□□ -2.01
SUS1YBR111W-A YNR068CP53754 272 aa2.48□□□□□ -2.01
SUS1YBR111W-A VAC7P53950 1165 aa2.48□□□□□ -2.01
SUS1YBR111W-A PRP38Q00723 242 aaPredicted RBP2.48□□□□□ -2.01
SUS1YBR111W-A VHS1Q03785 461 aa2.48□□□□□ -2.01
SUS1YBR111W-A AIM33Q04516 312 aa2.48□□□□□ -2.01
SUS1YBR111W-A YLH47Q06493 454 aa2.48□□□□□ -2.01
SUS1YBR111W-A YDL109CQ12103 647 aa2.48□□□□□ -2.01
SUS1YBR111W-A SFG1Q12507 346 aa2.48□□□□□ -2.01
SUS1YBR111W-A CCH1P50077 2039 aa2.47□□□□□ -2.01
SUS1YBR111W-A HEM4P06174 275 aa2.47□□□□□ -2.01
SUS1YBR111W-A PHO84P25297 587 aaKnown RBP2.47□□□□□ -2.01
SUS1YBR111W-A EFB1P32471 206 aaKnown RBP2.47□□□□□ -2.01
SUS1YBR111W-A ANP1P32629 500 aa2.47□□□□□ -2.01
SUS1YBR111W-A VAM7P32912 316 aa2.47□□□□□ -2.01
SUS1YBR111W-A SEO1P39709 593 aa2.47□□□□□ -2.01
SUS1YBR111W-A LCP5P40079 357 aaPredicted RBP2.47□□□□□ -2.01
SUS1YBR111W-A YGL262WP53054 175 aa2.47□□□□□ -2.01
SUS1YBR111W-A UTP6Q02354 440 aaKnown RBP2.47□□□□□ -2.01
SUS1YBR111W-A NFI1Q12216 726 aa2.47□□□□□ -2.01
SUS1YBR111W-A SFM1Q12314 213 aa2.47□□□□□ -2.01
SUS1YBR111W-A FOL3Q12676 427 aaPredicted RBP2.47□□□□□ -2.01
SUS1YBR111W-A FSH3Q99369 266 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms