RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 MYADMQ96S97 322 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 RNPEPQ9H4A4 650 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 MKNK2Q9HBH9 465 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 GPCPD1Q9NPB8 672 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 LTB4R2Q9NPC1 389 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 SALL2Q9Y467 1007 aaPredicted RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 UBR5O95071 2799 aaPredicted RBP5.22□□□□□ -1.57
HERC3-213ENST00000598772 PARP14Q460N5 1801 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 DOCK8Q8NF50 2099 aa5.22□□□□□ -1.57
HERC3-213ENST00000598772 MIA3Q5JRA6 1907 aa5.21□□□□□ -1.57
HERC3-213ENST00000598772 SPAARA0A1B0GVQ0 90 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 N4BP1O75113 896 aaKnown RBP5.21□□□□□ -1.58
HERC3-213ENST00000598772 UBTFL1P0CB47 393 aaPredicted RBP5.21□□□□□ -1.58
HERC3-213ENST00000598772 FDX1P10109 184 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 GNAT1P11488 350 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 SCG2P13521 617 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 CEACAM1P13688 526 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 TARSP26639 723 aaKnown RBP5.21□□□□□ -1.58
HERC3-213ENST00000598772 MAGEA9P43362 315 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 RARSP54136 660 aaKnown RBP5.21□□□□□ -1.58
HERC3-213ENST00000598772 ARHGAP4P98171 946 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 SLC30A10Q6XR72 485 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 RNF207Q6ZRF8 634 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 MDM1Q8TC05 714 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 NELL1Q92832 810 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 SPATA33Q96N06 139 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 RPP25Q9BUL9 199 aaKnown RBP5.21□□□□□ -1.58
HERC3-213ENST00000598772 EDEM2Q9BV94 578 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 USP26Q9BXU7 913 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 PIDD1Q9HB75 910 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 BOLA1Q9Y3E2 137 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 PAXBP1Q9Y5B6 917 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 NUMBLQ9Y6R0 609 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 LAMA1P25391 3075 aa5.21□□□□□ -1.58
HERC3-213ENST00000598772 TTC3P53804 2025 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 CCDC195A0A1B0GUA6 201 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 ENO4A6NNW6 628 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 H3BRB1 525 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 HAS3O00219 553 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 NFIBO00712 420 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 CAPN9O14815 690 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 PRKAB2O43741 272 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 F2P00734 622 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 LAG3P18627 525 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 MCCP23508 829 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 KLRC2P26717 231 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 STAT2P52630 851 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 SIM1P81133 766 aaPredicted RBP5.2□□□□□ -1.58
HERC3-213ENST00000598772 PRKCQQ04759 706 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 G3BP1Q13283 466 aaKnown RBP eCLIP5.2□□□□□ -1.58
HERC3-213ENST00000598772 LAMC2Q13753 1193 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 ZNF787Q6DD87 383 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 CCDC62Q6P9F0 684 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 KCNT2Q6UVM3 1135 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 TPRG1Q6ZUI0 275 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 KCTD1Q719H9 257 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 GET4Q7L5D6 327 aaPredicted RBP5.2□□□□□ -1.58
HERC3-213ENST00000598772 RSPH3Q86UC2 560 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 PIP4K2CQ8TBX8 421 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 STAG1Q8WVM7 1258 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 LINC01599Q8WXQ3 324 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 STAMQ92783 540 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 NXPE3Q969Y0 559 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 ZNF558Q96NG5 402 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 NELL2Q99435 816 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 TUT1Q9H6E5 874 aaKnown RBP5.2□□□□□ -1.58
HERC3-213ENST00000598772 SFXN1Q9H9B4 322 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 DCP1AQ9NPI6 582 aaPredicted RBP5.2□□□□□ -1.58
HERC3-213ENST00000598772 PRMT8Q9NR22 394 aaPredicted RBP5.2□□□□□ -1.58
HERC3-213ENST00000598772 SLC2A4RGQ9NR83 387 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 SPG21Q9NZD8 308 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 LZTS1Q9Y250 596 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 STK24Q9Y6E0 443 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 MRVI1Q9Y6F6 885 aa5.2□□□□□ -1.58
HERC3-213ENST00000598772 PTPRQQ9UMZ3 2332 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 FOCADQ5VW36 1801 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 KIAA1671Q9BY89 1806 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 NT5C1B-RDH14C9J2C7 533 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 TK2O00142 265 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 ATXN7O15265 892 aaPredicted RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 CAND2O75155 1236 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 PPFIA4O75335 1185 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 SSBP05455 408 aaKnown RBP eCLIP5.19□□□□□ -1.58
HERC3-213ENST00000598772 FGFR1P11362 822 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 LAMP2P13473 410 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 SLC1A4P43007 532 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 CXCL12P48061 93 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 METAP2P50579 478 aaKnown RBP eCLIP5.19□□□□□ -1.58
HERC3-213ENST00000598772 CCR3P51677 355 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 SATB1Q01826 763 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 PLCB3Q01970 1234 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 CFHR1Q03591 330 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 TMEM62Q0P6H9 643 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 NFX1Q12986 1120 aaKnown RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 OS9Q13438 667 aaPredicted RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 FAM26DQ5JW98 314 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 COLEC12Q5KU26 742 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 UTP14CQ5TAP6 766 aaKnown RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 SYDE2Q5VT97 1194 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms