RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PLEKHA8P1O95397 391 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 CYP7A1P22680 504 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 CALRP27797 417 aaKnown RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 GNAQP50148 359 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 PPIL2Q13356 520 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 ORC2Q13416 577 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 BIRC3Q13489 604 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 MTMR3Q13615 1198 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 SHHQ15465 462 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 MAN2A1Q16706 1144 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 PFKFB3Q16875 520 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 VWA3BQ502W6 1294 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 CEP85LQ5SZL2 805 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 FOXR2Q6PJQ5 311 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 ANKRD23Q86SG2 305 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 BLIDQ8IZY5 108 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 ENAHQ8N8S7 591 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 MYCBPAPQ8TBZ2 947 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 RNPC3Q96LT9 517 aaKnown RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 NECAB3Q96P71 396 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 UHRF1Q96T88 793 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
CPSF7-216ENST00000536548 C7orf25Q9BPX7 421 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 LRRC27Q9C0I9 530 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 CD209Q9NNX6 404 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 KLC4Q9NSK0 619 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 TCP11L1Q9NUJ3 509 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 AGPAT5Q9NUQ2 364 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 KBTBD4Q9NVX7 518 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 LRP2BPQ9P2M1 347 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 MAPK8IP1Q9UQF2 711 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 CFAP54Q96N23 3096 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 DOCK2Q92608 1830 aa8.52□□□□□ -1.04
CPSF7-216ENST00000536548 MUC6Q6W4X9 2439 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 TNPO2O14787 897 aaKnown RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 PRKAB2O43741 272 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 ORC4O43929 436 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 HEXIM1O94992 359 aaKnown RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 FGRP09769 529 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 EZRP15311 586 aaKnown RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 SLC8A1P32418 973 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 HSPA9P38646 679 aaKnown RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 EIF4A3P38919 411 aaKnown RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 MATR3P43243 847 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 CYP27A1Q02318 531 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 PDE4DQ08499 809 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 TROAPQ12815 778 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 IRF5Q13568 498 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 CUL1Q13616 776 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 RASGRF1Q13972 1273 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 NPY5RQ15761 445 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 SNCBQ16143 134 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 IFI16Q16666 785 aaKnown RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 AGBL2Q5U5Z8 902 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 TYW1BQ6NUM6 668 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 NFRKBQ6P4R8 1299 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 C4orf32Q8N8J7 132 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 DAGLBQ8NCG7 672 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 HDAC7Q8WUI4 952 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 TAF4BQ92750 862 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 SYN2Q92777 582 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 CCDC114Q96M63 670 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 CCT8L2Q96SF2 557 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 TSG101Q99816 390 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 LBHD1Q9BQE6 289 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 EHD4Q9H223 541 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 MLXIPQ9HAP2 919 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 TMBIM4Q9HC24 238 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 PLCB1Q9NQ66 1216 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 BSDC1Q9NW68 430 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-216ENST00000536548 MCM8Q9UJA3 840 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 PCDHA4Q9UN74 947 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 CAPN6Q9Y6Q1 641 aa8.52□□□□□ -1.05
CPSF7-216ENST00000536548 CHD7Q9P2D1 2997 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 GMNCA6NCL1 334 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 GCOM1H8Y6P7 765 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-216ENST00000536548 RBAK-RBAKDNI3L0D1 243 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 MYO1FO00160 1098 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 WNT7AO00755 349 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 RASSF9O75901 435 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 MYZAPP0CAP1 466 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 GHRP10912 638 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 ERCC3P19447 782 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 ELF1P32519 619 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 PSEN1P49768 467 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 PMS1P54277 932 aaKnown RBP8.51□□□□□ -1.05
CPSF7-216ENST00000536548 CACNB3P54284 484 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 ASIC1P78348 528 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 SLC7A5Q01650 507 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 TNFAIP1Q13829 316 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 GRIN2CQ14957 1233 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 CDC37Q16543 378 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-216ENST00000536548 IL17AQ16552 155 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 MIIPQ5JXC2 388 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 WLSQ5T9L3 541 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms