RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 MAD2L2Q9UI95 211 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 LZTS1Q9Y250 596 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 LAMA4Q16363 1823 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 IGF2RP11717 2491 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 KLRF2D3W0D1 207 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 LRP3O75074 770 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 RFX1P22670 979 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 CCND2P30279 289 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 RING1Q06587 406 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 RUFY4Q6ZNE9 571 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 NPAS4Q8IUM7 802 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 SETD4Q9NVD3 440 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 IGSF9Q9P2J2 1179 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 SIT1Q9Y3P8 196 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 PCDHB12Q9Y5F1 795 aa13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 SMG1Q96Q15 3661 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-228ENST00000492150 PALM3A6NDB9 673 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 GCOM1H8Y6P7 765 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 ZIC2O95409 532 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 DCNP07585 359 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 POLR2MP0CAP2 368 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 ADAM17P78536 824 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 MRPS9P82933 396 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 SEC23AQ15436 765 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 IFIT1BQ5T764 474 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 LLGL2Q6P1M3 1020 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 CWC27Q6UX04 472 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 FCHSD1Q86WN1 690 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 ATRIPQ8WXE1 791 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 ACSF2Q96CM8 615 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 KRT23Q9C075 422 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 KCNK12Q9HB15 430 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 AAASQ9NRG9 546 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 DBR1Q9UK59 544 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 TELO2Q9Y4R8 837 aa13.52□□□□□ -0.25
CACNA1C-228ENST00000492150 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 POTEMA6NI47 508 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 C1QTNF9BB2RNN3 333 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 PPFIA3O75145 1194 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 FGF18O76093 207 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 C1QTNF9P0C862 333 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 ATAT1Q5SQI0 421 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 CYFIP1Q7L576 1253 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 TRIM50Q86XT4 487 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 NELL1Q92832 810 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 PIGSQ96S52 555 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 GPR20Q99678 358 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 UBAC1Q9BSL1 405 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 USP26Q9BXU7 913 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 HCFC2Q9Y5Z7 792 aa13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-228ENST00000492150 FRMPD4Q14CM0 1322 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 BAZ2BQ9UIF8 2168 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 SRRM3A6NNA2 597 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 NOP56O00567 594 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 CHRNA1P02708 482 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 GNAT1P11488 350 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 METTL7BQ6UX53 244 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 CYB5R4Q7L1T6 521 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 OTOP3Q7RTS5 596 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 PLEKHM2Q8IWE5 1019 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 LMBR1Q8WVP7 490 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 RIOX1Q9H6W3 641 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 ZSCAN32Q9NX65 697 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 NBEAQ8NFP9 2946 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 RALGAPA1Q6GYQ0 2036 aa13.5□□□□□ -0.25
CACNA1C-228ENST00000492150 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 CYTH3O43739 400 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 STAG3L1P0CL83 205 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 GHRP10912 638 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 GLULP15104 373 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 PLCB3Q01970 1234 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 NEDD9Q14511 834 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 GNPTABQ3T906 1256 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 UTP14CQ5TAP6 766 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 TMEM121BQ9BXQ6 578 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 OSBPL3Q9H4L5 887 aa13.49□□□□□ -0.25
CACNA1C-228ENST00000492150 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms