RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 TARBP2Q15633 366 aaKnown RBP14.13□□□□□ -0.15
SCLT1-202ENST00000439369 KCNA10Q16322 511 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 TRIM50Q86XT4 487 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 LRRC15Q8TF66 581 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 KAT2BQ92831 832 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 PLIN2Q99541 437 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 JPH2Q9BR39 696 aaPredicted RBP14.13□□□□□ -0.15
SCLT1-202ENST00000439369 NUP62CLQ9H1M0 184 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 BHMT2Q9H2M3 363 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 CYP26B1Q9NR63 512 aa14.13□□□□□ -0.15
SCLT1-202ENST00000439369 BMP2KQ9NSY1 1161 aaPredicted RBP14.13□□□□□ -0.15
SCLT1-202ENST00000439369 SEPT9Q9UHD8 586 aaPredicted RBP14.13□□□□□ -0.15
SCLT1-202ENST00000439369 WDR81Q562E7 1941 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 KBTBD13C9JR72 458 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
SCLT1-202ENST00000439369 ASGR1P07306 291 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 GUCY2CP25092 1073 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 ACLYP53396 1101 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
SCLT1-202ENST00000439369 MCM6Q14566 821 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 MFSD10Q14728 455 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 POSTNQ15063 836 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 XKR9Q5GH70 373 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 CCDC183Q5T5S1 534 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 SESTD1Q86VW0 696 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 ANKLE1Q8NAG6 615 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 CEP170P1Q96L14 293 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 DEFB118Q96PH6 123 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 C7orf25Q9BPX7 421 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 MCOLN1Q9GZU1 580 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 PHF24Q9UPV7 400 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 MYH9P35579 1960 aaKnown RBP14.12□□□□□ -0.15
SCLT1-202ENST00000439369 NRCAMQ92823 1304 aa14.12□□□□□ -0.15
SCLT1-202ENST00000439369 MAGEB2O15479 319 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 DGAT1O75907 488 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 LETM1O95202 739 aaPredicted RBP14.11□□□□□ -0.15
SCLT1-202ENST00000439369 SGPL1O95470 568 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 CYP11B2P19099 503 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 HOXC8P31273 242 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 PTPN11Q06124 597 aaPredicted RBP14.11□□□□□ -0.15
SCLT1-202ENST00000439369 KIAA0753Q2KHM9 967 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 GPBP1Q86WP2 473 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 MCPH1Q8NEM0 835 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 GTPBP4Q9BZE4 634 aaKnown RBP14.11□□□□□ -0.15
SCLT1-202ENST00000439369 TRIM9Q9C026 710 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 RNPEPQ9H4A4 650 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
SCLT1-202ENST00000439369 PVALEFA0A1B0GWK0 134 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 ZBTB39O15060 712 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 SMC2O95347 1197 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 SSBP05455 408 aaKnown RBP eCLIP14.1□□□□□ -0.15
SCLT1-202ENST00000439369 GNAT1P11488 350 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 INSRRP14616 1297 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 MARK3P27448 753 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 GJA8P48165 433 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
SCLT1-202ENST00000439369 PPFIA1Q13136 1202 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 PLA2G4FQ68DD2 849 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 RINT1Q6NUQ1 792 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 NFRKBQ6P4R8 1299 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 PADI6Q6TGC4 694 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 RBM43Q6ZSC3 357 aaKnown RBP14.1□□□□□ -0.15
SCLT1-202ENST00000439369 C1orf186Q6ZWK4 172 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 U2AF1L4Q8WU68 220 aaKnown RBP14.1□□□□□ -0.15
SCLT1-202ENST00000439369 SLC7A3Q8WY07 619 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 GLT1D1Q96MS3 346 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 CEP89Q96ST8 783 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 MTRQ99707 1265 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 DHX33Q9H6R0 707 aaKnown RBP14.1□□□□□ -0.15
SCLT1-202ENST00000439369 PDLIM7Q9NR12 457 aa14.1□□□□□ -0.15
SCLT1-202ENST00000439369 SCN10AQ9Y5Y9 1956 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 ARID2Q68CP9 1835 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 IGKV6-21A0A0C4DH24 114 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 MYMKA6NI61 221 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 ZBTB42B2RXF5 422 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-202ENST00000439369 RPLP2P05387 115 aaKnown RBP14.09□□□□□ -0.15
SCLT1-202ENST00000439369 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 AFMP43652 599 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 POLGP54098 1239 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-202ENST00000439369 NPEPPSP55786 919 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 RTP1P59025 263 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 TBC1D8BQ0IIM8 1120 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 DPYDQ12882 1025 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 GRIK4Q16099 956 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 MTERF2Q49AM1 385 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 ARSHQ5FYA8 562 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 NT5DC1Q5TFE4 455 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 C7orf31Q8N865 590 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 RETREG2Q8NC44 543 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 SPATA20Q8TB22 786 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 DDX12PQ92771 950 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 CCDC47Q96A33 483 aaKnown RBP14.09□□□□□ -0.15
SCLT1-202ENST00000439369 DRC1Q96MC2 740 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 GSDMAQ96QA5 445 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms