RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 VPS37CA5D8V6 355 aaPredicted RBP9.87□□□□□ -0.83
HDAC1-202ENST00000428704 KLRF2D3W0D1 207 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 SH2B2O14492 632 aaPredicted RBP9.87□□□□□ -0.83
HDAC1-202ENST00000428704 LINC01565O15544 149 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 CYTH3O43739 400 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 KPNA6O60684 536 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 GADD45BO75293 160 aaPredicted RBP9.87□□□□□ -0.83
HDAC1-202ENST00000428704 EYA4O95677 639 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 EDNRBP24530 442 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 CALML3P27482 149 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 ICAM3P32942 547 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 CTNNB1P35222 781 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 GTF2F1P35269 517 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC1-202ENST00000428704 LIFRP42702 1097 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 RESTQ13127 1097 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 STK3Q13188 491 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 COL9A2Q14055 689 aaPredicted RBP9.87□□□□□ -0.83
HDAC1-202ENST00000428704 WTAPQ15007 396 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 PTPN21Q16825 1174 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
HDAC1-202ENST00000428704 THSD4Q6ZMP0 1018 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 RNF207Q6ZRF8 634 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 SGMS1Q86VZ5 419 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 KIAA2013Q8IYS2 634 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 FAM184AQ8NB25 1140 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 KCNG4Q8TDN1 519 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 TBC1D5Q92609 795 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 PPP1R9BQ96SB3 815 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 WDR11Q9BZH6 1224 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 COL20A1Q9P218 1284 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 PNMA2Q9UL42 364 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 BRPF3Q9ULD4 1205 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 CFAP47Q6ZTR5 3102 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 ACACBO00763 2458 aa9.87□□□□□ -0.83
HDAC1-202ENST00000428704 ABCB11O95342 1321 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 PTPRSQ13332 1948 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 JAK2O60674 1132 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 CKBP12277 381 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 RCAN1P53805 252 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 CCDC183Q5T5S1 534 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 GDF6Q6KF10 455 aaPredicted RBP9.86□□□□□ -0.83
HDAC1-202ENST00000428704 ZNF654Q8IZM8 581 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 TMTC2Q8N394 836 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 TMEM105Q8N8V8 129 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 SMRP1Q8NCR6 262 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 DHX38Q92620 1227 aaKnown RBP9.86□□□□□ -0.83
HDAC1-202ENST00000428704 MSLNLQ96KJ4 702 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 MYL10Q9BUA6 226 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 PHF7Q9BWX1 381 aaPredicted RBP9.86□□□□□ -0.83
HDAC1-202ENST00000428704 LRRC2Q9BYS8 371 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 LMAN2LQ9H0V9 348 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 RIOX1Q9H6W3 641 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 VAT1LQ9HCJ6 419 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 CFAP45Q9UL16 551 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 DMXL1Q9Y485 3027 aa9.86□□□□□ -0.83
HDAC1-202ENST00000428704 ATRXP46100 2492 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 TET1Q8NFU7 2136 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 LOC102724159A0A0B4J2E5 919 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 ERICH2A1L162 156 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 TRIM66O15016 1216 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 ZBTB5O15062 677 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 GRM6O15303 877 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 LGR5O75473 907 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 FDPSP14324 419 aaKnown RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 NASPP49321 788 aaPredicted RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 GHRHRQ02643 423 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 RBL2Q08999 1139 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 ADAM15Q13444 863 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 SART3Q15020 963 aaKnown RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 PWP2Q15269 919 aaKnown RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 UVSSAQ2YD98 709 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 SYTL5Q8TDW5 730 aaPredicted RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 PPP2R3CQ969Q6 453 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 PIGSQ96S52 555 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 C11orf84Q9BUA3 381 aaPredicted RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 GDPD2Q9HCC8 539 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 ADD3Q9UEY8 706 aaKnown RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 RCOR1Q9UKL0 485 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 USP15Q9Y4E8 981 aaPredicted RBP9.85□□□□□ -0.83
HDAC1-202ENST00000428704 NID2Q14112 1375 aa9.85□□□□□ -0.83
HDAC1-202ENST00000428704 KLF18A0A0U1RQI7 1052 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 RBM47A0AV96 593 aaKnown RBP9.84□□□□□ -0.83
HDAC1-202ENST00000428704 SYCE3A1L190 88 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 H3BQV1 296 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 RBAK-RBAKDNI3L0D1 243 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 DDAH1O94760 285 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 UPP2O95045 317 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 PLEKHA8P1O95397 391 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 RB1P06400 928 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 RXRAP19793 462 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
HDAC1-202ENST00000428704 HSD17B4P51659 736 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 CCDC173Q0VFZ6 552 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 PPP2R5BQ15173 497 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 AMHR2Q16671 573 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 CATIPQ7Z7H3 387 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 HOMER1Q86YM7 354 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 DNERQ8NFT8 737 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 ANP32BQ92688 251 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms