RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Gpatch3Q8BIY1 525 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Pcdhb15Q91Y04 786 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Dqx1Q924H9 718 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Calml3Q9D6P8 149 aa9.27□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cyp2j7A0A140T8U1 504 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cdr2lA2A6T1 465 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 1700113H08RikE9Q9Q5 327 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gml2G5E8L7 176 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nck2O55033 380 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Idh1O88844 414 aaKnown RBP9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gja8P28236 440 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Scarf1Q5ND28 820 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 RragbQ6NTA4 374 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ube2q1Q7TSS2 422 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Lrch3Q8BVU0 778 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Olfr1494Q8VGP8 315 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ankrd54Q91WK7 299 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Rtfdc1Q99K95 307 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Alg13Q9D8C3 1166 aaKnown RBP9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Irx5Q9JKQ4 484 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Igbp1bQ9QZ29 343 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Mtmr1Q9Z2C4 669 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Timm44O35857 452 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 AcrP23578 436 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm3414Q3TNU4 584 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Arhgef16Q3U5C8 713 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Parp3Q3ULW8 533 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Pla2g4eQ50L42 875 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cnnm4Q69ZF7 771 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nipa1Q8BHK1 323 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Znf467Q8JZL0 594 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Atp2a1Q8R429 994 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Mis18aQ9CZJ6 204 aa9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Fxr2Q9WVR4 673 aaKnown RBP9.26□□□□□ -0.93
Trim39-205ENSMUST00000173369 Krt36B1AQ75 473 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ccl26F8VQM2 93 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cd70O55237 195 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Psmc5P62196 406 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 GypcQ78HU7 95 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 VcpkmtQ8C436 228 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Spred2Q924S7 410 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Znf704Q9ERQ3 566 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Stxbp4Q9WV89 557 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Large1Q9Z1M7 756 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Pramef17A2ASJ1 475 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Capn2O08529 700 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 GclmO09172 274 aaKnown RBP9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 EdnrbP48302 442 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Fam109bQ14B98 259 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Klra5Q60652 266 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Epha7Q61772 998 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Naa35Q6PHQ8 725 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Znf771Q8BJ90 317 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Fbxo44Q8BK26 255 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Zfp202Q8C879 641 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Wrap53Q8VC51 532 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Lrp2bpQ9D4C6 346 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Lmbr1Q9JIT0 490 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Akt3Q9WUA6 479 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Atad5Q4QY64 1826 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm45194A0A140LJG2 572 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Pdzrn4E9PUZ9 1014 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cd68P31996 326 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 NcanP55066 1268 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Fads2p1Q0VAX3 487 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cep126Q0VBV7 1103 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Vwa3aQ3UVV9 1148 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Hdac4Q6NZM9 1076 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gja6Q6S5G4 283 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nap1l4Q78ZA7 375 aaKnown RBP9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Dusp4Q8BFV3 398 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Grik4Q8BMF5 956 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 NkrfQ8BY02 690 aaKnown RBP9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Dhx32Q8BZS9 744 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Smc1bQ920F6 1248 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Smco2Q9DA21 347 aa9.25□□□□□ -0.93
Trim39-205ENSMUST00000173369 Abcb11Q9QY30 1321 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm43638A0A0J9YU36 694 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Mdm4O35618 489 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 PtprcP06800 1291 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ccr1P51675 355 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 MafbP54841 323 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cdca2Q14B71 982 aaKnown RBP9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tgfbrap1Q3UR70 860 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ccdc113Q8C5T8 377 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ccdc150Q8CDI7 1110 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Crlf2Q8CII9 359 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Iqsec1Q8R0S2 961 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Plekhh3Q8VCE9 796 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Kri1Q8VDQ9 704 aaKnown RBP9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Antxr1Q9CZ52 562 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Col12a1Q60847 3120 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ccdc173A0JLY1 547 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cacna2d4Q5RJF7 1116 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ppp1r13bQ62415 1087 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 N4bp3Q8C7U1 537 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ero1aQ8R180 464 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Atp6ap2Q9CYN9 350 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Extl3Q9WVL6 918 aa9.24□□□□□ -0.93
Trim39-205ENSMUST00000173369 Wdr46Q9Z0H1 622 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 198.5 ms