RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	SPR6	Q01684	191 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	CSI1	Q04368	295 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	TPT1	Q12272	230 aa	Known RBP	4.04	□□□□□ -1.76
CMR3	YPR013C	LDB17	Q12342	491 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	NCA2	Q12374	616 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	YOP1	Q12402	180 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	YOR338W	Q99326	363 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	CAR2	P07991	424 aa	Known RBP	4.03	□□□□□ -1.76
CMR3	YPR013C	YCL068C	P25593	260 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	YUR1	P26725	428 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	RAD23	P32628	398 aa	Known RBP	4.03	□□□□□ -1.76
CMR3	YPR013C	LOS1	P33418	1100 aa	Predicted RBP	4.03	□□□□□ -1.76
CMR3	YPR013C	PET100	P38958	111 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	MST28	P39552	234 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	UTP25	P40498	721 aa	Known RBP	4.03	□□□□□ -1.76
CMR3	YPR013C	YIR016W	P40572	265 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	CDC40	P40968	455 aa	Predicted RBP	4.03	□□□□□ -1.76
CMR3	YPR013C	AVT4	P50944	713 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	ATC1	Q04005	294 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	YMR034C	Q05131	434 aa	Predicted RBP	4.03	□□□□□ -1.76
CMR3	YPR013C	BUR2	Q05949	395 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	YAP7	Q08182	245 aa		4.03	□□□□□ -1.76
CMR3	YPR013C	GLN3	P18494	730 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	MXR2	P25566	168 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	ITR1	P30605	584 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	COT1	P32798	439 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	VAM7	P32912	316 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	RPC25	P35718	212 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	KKQ8	P36004	724 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	TPO5	P36029	618 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	DHH1	P39517	506 aa	Known RBP	4.02	□□□□□ -1.77
CMR3	YPR013C	HAT2	P39984	401 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	SHO1	P40073	367 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	BTT1	P40314	149 aa	Predicted RBP	4.02	□□□□□ -1.77
CMR3	YPR013C	SEC9	P40357	651 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	SIM1	P40472	476 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	SEC27	P41811	889 aa	Known RBP	4.02	□□□□□ -1.77
CMR3	YPR013C	MDV1	P47025	714 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	LIA1	P47120	325 aa	Known RBP	4.02	□□□□□ -1.77
CMR3	YPR013C	RRN9	P53437	365 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	SEG1	Q04279	960 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	COQ11	Q05892	277 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	APC5	Q08683	685 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	RUD3	Q12234	484 aa	Known RBP	4.02	□□□□□ -1.77
CMR3	YPR013C	CSR2	Q12734	1121 aa		4.02	□□□□□ -1.77
CMR3	YPR013C	POM152	P39685	1337 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	UNG1	P12887	359 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	SAM2	P19358	384 aa	Known RBP	4.01	□□□□□ -1.77
CMR3	YPR013C	COY1	P34237	679 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	MCR1	P36060	302 aa	Known RBP	4.01	□□□□□ -1.77
CMR3	YPR013C	HSM3	P38348	480 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	YMR262W	P38430	313 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
CMR3	YPR013C	RRT5	P43607	289 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	SFH5	P47008	294 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	IKS1	P47042	667 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	AZR1	P50080	613 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	YNL260C	P53846	198 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	CWC21	Q03375	135 aa	Known RBP	4.01	□□□□□ -1.77
CMR3	YPR013C	NAT4	Q04751	285 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	BCP1	Q06338	283 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	DNL4	Q08387	944 aa	Predicted RBP	4.01	□□□□□ -1.77
CMR3	YPR013C	YPL199C	Q08954	240 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	AFT2	Q08957	416 aa		4.01	□□□□□ -1.77
CMR3	YPR013C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
CMR3	YPR013C	YCP4	P25349	247 aa	Known RBP	4	□□□□□ -1.77
CMR3	YPR013C	YCR022C	P25620	114 aa		4	□□□□□ -1.77
CMR3	YPR013C	ICL1	P28240	557 aa	Predicted RBP	4	□□□□□ -1.77
CMR3	YPR013C	VMA5	P31412	392 aa	Known RBP	4	□□□□□ -1.77
CMR3	YPR013C	HXT1	P32465	570 aa		4	□□□□□ -1.77
CMR3	YPR013C	YEF1	P32622	495 aa		4	□□□□□ -1.77
CMR3	YPR013C	TRS65	P32893	560 aa		4	□□□□□ -1.77
CMR3	YPR013C	PTR2	P32901	601 aa		4	□□□□□ -1.77
CMR3	YPR013C	MRPS5	P33759	307 aa		4	□□□□□ -1.77
CMR3	YPR013C	PEX32	P38292	413 aa		4	□□□□□ -1.77
CMR3	YPR013C	FET3	P38993	636 aa		4	□□□□□ -1.77
CMR3	YPR013C	FAA2	P39518	744 aa		4	□□□□□ -1.77
CMR3	YPR013C	ALG8	P40351	577 aa		4	□□□□□ -1.77
CMR3	YPR013C	DIM1	P41819	318 aa	Known RBP	4	□□□□□ -1.77
CMR3	YPR013C	YGR168C	P53293	376 aa		4	□□□□□ -1.77
CMR3	YPR013C	YMR181C	Q03231	154 aa		4	□□□□□ -1.77
CMR3	YPR013C	CCE1	Q03702	353 aa		4	□□□□□ -1.77
CMR3	YPR013C	RIM13	Q03792	727 aa		4	□□□□□ -1.77
CMR3	YPR013C	SHS1	Q07657	551 aa		4	□□□□□ -1.77
CMR3	YPR013C	YPR1	Q12458	312 aa		4	□□□□□ -1.77
CMR3	YPR013C	FMP16	Q12497	93 aa		4	□□□□□ -1.77
CMR3	YPR013C	RPL24A	P04449	155 aa	Known RBP	3.99	□□□□□ -1.77
CMR3	YPR013C	GDH1	P07262	454 aa	Known RBP	3.99	□□□□□ -1.77
CMR3	YPR013C	YFL068W	P0CX99	160 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	YLL066W-A	P0CY00	160 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	YLL067W-A	P0CY01	160 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	SLY1	P22213	666 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	EXG1	P23776	448 aa	Known RBP	3.99	□□□□□ -1.77
CMR3	YPR013C	NDC1	P32500	655 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	ZUO1	P32527	433 aa	Known RBP	3.99	□□□□□ -1.77
CMR3	YPR013C	RPT5	P33297	434 aa	Known RBP	3.99	□□□□□ -1.77
CMR3	YPR013C	ECT1	P33412	323 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	MYO3	P36006	1272 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	XBP1	P40489	647 aa		3.99	□□□□□ -1.77
CMR3	YPR013C	LSC1	P53598	329 aa	Known RBP	3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms