RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W BCH1Q05029 724 aa3.53□□□□□ -1.84
SWI1YPL016W MFG1Q07684 458 aa3.53□□□□□ -1.84
SWI1YPL016W YPD1Q07688 167 aa3.53□□□□□ -1.84
SWI1YPL016W CUE5Q08412 411 aaKnown RBP3.53□□□□□ -1.84
SWI1YPL016W ERG9P29704 444 aa3.53□□□□□ -1.84
SWI1YPL016W BIO2P32451 375 aa3.53□□□□□ -1.84
SWI1YPL016W NEO1P40527 1151 aa3.53□□□□□ -1.84
SWI1YPL016W ASN2P49090 572 aaKnown RBP3.53□□□□□ -1.84
SWI1YPL016W PKP2P53170 491 aa3.53□□□□□ -1.84
SWI1YPL016W NOG2P53742 486 aaKnown RBP3.53□□□□□ -1.84
SWI1YPL016W YDR132CQ03900 495 aa3.53□□□□□ -1.84
SWI1YPL016W SIZ1Q04195 904 aa3.53□□□□□ -1.84
SWI1YPL016W NAT4Q04751 285 aa3.53□□□□□ -1.84
SWI1YPL016W HOF1Q05080 669 aa3.53□□□□□ -1.84
SWI1YPL016W ARO10Q06408 635 aa3.53□□□□□ -1.84
SWI1YPL016W AAD15Q08361 143 aa3.53□□□□□ -1.84
SWI1YPL016W PCC1Q3E833 88 aa3.53□□□□□ -1.84
SWI1YPL016W CYC1P00044 109 aaPredicted RBP3.53□□□□□ -1.84
SWI1YPL016W SEC53P07283 254 aaKnown RBP3.53□□□□□ -1.84
SWI1YPL016W RPC40P07703 335 aaKnown RBP3.53□□□□□ -1.84
SWI1YPL016W RAM1P22007 431 aa3.53□□□□□ -1.84
SWI1YPL016W STP22P25604 385 aa3.53□□□□□ -1.84
SWI1YPL016W ASH1P34233 588 aa3.53□□□□□ -1.84
SWI1YPL016W MAP2P38174 421 aaKnown RBP3.53□□□□□ -1.84
SWI1YPL016W PTC7P38797 343 aa3.53□□□□□ -1.84
SWI1YPL016W POP2P39008 433 aa3.53□□□□□ -1.84
SWI1YPL016W YIR007WP40566 764 aa3.53□□□□□ -1.84
SWI1YPL016W YGL159WP53110 370 aa3.53□□□□□ -1.84
SWI1YPL016W VOA1P53262 265 aa3.53□□□□□ -1.84
SWI1YPL016W YPL014WQ02606 381 aa3.53□□□□□ -1.84
SWI1YPL016W TVP18Q04767 167 aa3.53□□□□□ -1.84
SWI1YPL016W YLR283WQ05867 314 aa3.53□□□□□ -1.84
SWI1YPL016W PMA1P05030 918 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W SSA3P09435 649 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W SEC22P22214 214 aa3.52□□□□□ -1.85
SWI1YPL016W YCP4P25349 247 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W POF1P25576 258 aa3.52□□□□□ -1.85
SWI1YPL016W PRP45P28004 379 aaPredicted RBP3.52□□□□□ -1.85
SWI1YPL016W NDT80P38830 627 aa3.52□□□□□ -1.85
SWI1YPL016W PTH1P38876 190 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W IPT1P38954 527 aa3.52□□□□□ -1.85
SWI1YPL016W COG3P40094 801 aa3.52□□□□□ -1.85
SWI1YPL016W ZIM17P42844 174 aa3.52□□□□□ -1.85
SWI1YPL016W PMT4P46971 762 aa3.52□□□□□ -1.85
SWI1YPL016W MND1P53102 219 aa3.52□□□□□ -1.85
SWI1YPL016W SLD3P53135 668 aa3.52□□□□□ -1.85
SWI1YPL016W YGL039WP53183 348 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W CGR1P53188 120 aa3.52□□□□□ -1.85
SWI1YPL016W GET1P53192 235 aa3.52□□□□□ -1.85
SWI1YPL016W YDR415CQ04033 374 aaPredicted RBP3.52□□□□□ -1.85
SWI1YPL016W OPT2Q06593 877 aa3.52□□□□□ -1.85
SWI1YPL016W RRP40Q08285 240 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W VHS3Q08438 674 aa3.52□□□□□ -1.85
SWI1YPL016W YDR215CQ12240 137 aa3.52□□□□□ -1.85
SWI1YPL016W YPL247CQ12523 523 aa3.52□□□□□ -1.85
SWI1YPL016W SPS2P08459 502 aa3.52□□□□□ -1.85
SWI1YPL016W COS2P0CX12 379 aa3.52□□□□□ -1.85
SWI1YPL016W COS3P0CX13 379 aa3.52□□□□□ -1.85
SWI1YPL016W WHI2P12611 486 aa3.52□□□□□ -1.85
SWI1YPL016W YCR015CP25616 317 aa3.52□□□□□ -1.85
SWI1YPL016W ABD1P32783 436 aaPredicted RBP3.52□□□□□ -1.85
SWI1YPL016W TGL1P34163 548 aa3.52□□□□□ -1.85
SWI1YPL016W CST26P38226 397 aa3.52□□□□□ -1.85
SWI1YPL016W PEX28P38848 579 aa3.52□□□□□ -1.85
SWI1YPL016W RPN11P43588 306 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W COX16P47081 118 aa3.52□□□□□ -1.85
SWI1YPL016W BUD32P53323 261 aa3.52□□□□□ -1.85
SWI1YPL016W HHO1P53551 258 aa3.52□□□□□ -1.85
SWI1YPL016W YNR065CP53751 1116 aa3.52□□□□□ -1.85
SWI1YPL016W YMD8Q03697 442 aa3.52□□□□□ -1.85
SWI1YPL016W YLR179CQ06252 201 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W GUD1Q07729 489 aa3.52□□□□□ -1.85
SWI1YPL016W VMA9Q3E7B6 73 aa3.52□□□□□ -1.85
SWI1YPL016W AI5_BETAQ9ZZX0 354 aa3.52□□□□□ -1.85
SWI1YPL016W ALG7P07286 448 aa3.52□□□□□ -1.85
SWI1YPL016W DFR1P07807 211 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SWI1YPL016W SLM5P25345 492 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W TAH1P25638 111 aaPredicted RBP3.52□□□□□ -1.85
SWI1YPL016W TCM62P38228 572 aaKnown RBP3.52□□□□□ -1.85
SWI1YPL016W MLH1P38920 769 aa3.52□□□□□ -1.85
SWI1YPL016W FAA2P39518 744 aa3.52□□□□□ -1.85
SWI1YPL016W ARF3P40994 183 aaRIP-Chip data3.52□□□□□ -1.85 RIP-Chip
SWI1YPL016W IME4P41833 600 aa3.52□□□□□ -1.85
SWI1YPL016W MAF1P41910 395 aa3.52□□□□□ -1.85
SWI1YPL016W TVP15Q03860 143 aa3.52□□□□□ -1.85
SWI1YPL016W UPS3Q04006 179 aa3.52□□□□□ -1.85
SWI1YPL016W RCO1Q04779 684 aa3.52□□□□□ -1.85
SWI1YPL016W IRC10Q08118 586 aa3.52□□□□□ -1.85
SWI1YPL016W RRG7Q08774 242 aaPredicted RBP3.52□□□□□ -1.85
SWI1YPL016W LAP2Q10740 671 aa3.52□□□□□ -1.85
SWI1YPL016W HRT3Q12347 344 aa3.52□□□□□ -1.85
SWI1YPL016W CYT1P07143 309 aa3.51□□□□□ -1.85
SWI1YPL016W NUP1P20676 1076 aa3.51□□□□□ -1.85
SWI1YPL016W PPH21P23594 369 aa3.51□□□□□ -1.85
SWI1YPL016W YCL002CP25565 263 aa3.51□□□□□ -1.85
SWI1YPL016W VAC17P25591 423 aa3.51□□□□□ -1.85
SWI1YPL016W COQ3P27680 312 aa3.51□□□□□ -1.85
SWI1YPL016W VMA5P31412 392 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W MOT2P34909 587 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W GMH1P36125 273 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms