RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W ISC1P40015 477 aaKnown RBP3.84□□□□□ -1.8
CHL1YPL008W KRE29P40026 464 aa3.84□□□□□ -1.8
CHL1YPL008W DDI1P40087 428 aa3.84□□□□□ -1.8
CHL1YPL008W GID8P40208 455 aa3.84□□□□□ -1.8
CHL1YPL008W OSW5P40219 148 aa3.84□□□□□ -1.8
CHL1YPL008W YRB2P40517 327 aa3.84□□□□□ -1.8
CHL1YPL008W BIT61P47041 543 aa3.84□□□□□ -1.8
CHL1YPL008W HST3P53687 447 aa3.84□□□□□ -1.8
CHL1YPL008W SED5Q01590 340 aa3.84□□□□□ -1.8
CHL1YPL008W TY2A-DR2Q03483 438 aa3.84□□□□□ -1.8
CHL1YPL008W RSN1Q03516 953 aa3.84□□□□□ -1.8
CHL1YPL008W SLF1Q12034 447 aaKnown RBP3.84□□□□□ -1.8
CHL1YPL008W MLH3Q12083 715 aa3.84□□□□□ -1.8
CHL1YPL008W UPC2Q12151 913 aa3.84□□□□□ -1.8
CHL1YPL008W YPR011CQ12251 326 aa3.84□□□□□ -1.8
CHL1YPL008W TY2A-BQ12260 438 aa3.84□□□□□ -1.8
CHL1YPL008W TY2A-OR2Q12293 438 aa3.84□□□□□ -1.8
CHL1YPL008W TY2A-DR1Q12392 438 aa3.84□□□□□ -1.8
CHL1YPL008W TY2A-OR1Q12439 438 aa3.84□□□□□ -1.8
CHL1YPL008W TY2A-DR3Q99303 438 aa3.84□□□□□ -1.8
CHL1YPL008W VCX1Q99385 411 aa3.84□□□□□ -1.8
CHL1YPL008W SOD2P00447 233 aa3.83□□□□□ -1.8
CHL1YPL008W ARG81P05085 880 aa3.83□□□□□ -1.8
CHL1YPL008W LAT1P12695 482 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W CTR86P25355 563 aa3.83□□□□□ -1.8
CHL1YPL008W RER1P25560 188 aa3.83□□□□□ -1.8
CHL1YPL008W IMG2P25642 146 aaPredicted RBP3.83□□□□□ -1.8
CHL1YPL008W RFA2P26754 273 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W UBC8P28263 218 aa3.83□□□□□ -1.8
CHL1YPL008W SAC1P32368 623 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W ASF2P32448 525 aaPredicted RBP3.83□□□□□ -1.8
CHL1YPL008W NUP2P32499 720 aa3.83□□□□□ -1.8
CHL1YPL008W CAT2P32796 670 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W SDH3P33421 198 aa3.83□□□□□ -1.8
CHL1YPL008W COS111P38308 924 aa3.83□□□□□ -1.8
CHL1YPL008W BFR1P38934 470 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
CHL1YPL008W ERV46P39727 415 aa3.83□□□□□ -1.8
CHL1YPL008W PTR3P43606 678 aa3.83□□□□□ -1.8
CHL1YPL008W BIR1P47134 954 aa3.83□□□□□ -1.8
CHL1YPL008W IGO1P53897 168 aa3.83□□□□□ -1.8
CHL1YPL008W MET31Q03081 177 aa3.83□□□□□ -1.8
CHL1YPL008W ARX1Q03862 593 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W RRP17Q04031 235 aaPredicted RBP3.83□□□□□ -1.8
CHL1YPL008W NEJ1Q06148 342 aa3.83□□□□□ -1.8
CHL1YPL008W SWA2Q06677 668 aa3.83□□□□□ -1.8
CHL1YPL008W DTD1Q07648 150 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
CHL1YPL008W YPL245WQ12179 454 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W SCM3Q12334 223 aa3.83□□□□□ -1.8
CHL1YPL008W PDH1Q12428 516 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W PHO5P00635 467 aa3.83□□□□□ -1.8
CHL1YPL008W DST1P07273 309 aa3.83□□□□□ -1.8
CHL1YPL008W UNG1P12887 359 aa3.83□□□□□ -1.8
CHL1YPL008W PEX1P24004 1043 aa3.83□□□□□ -1.8
CHL1YPL008W RSC6P25632 483 aa3.83□□□□□ -1.8
CHL1YPL008W VMA8P32610 256 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W PMT1P33775 817 aa3.83□□□□□ -1.8
CHL1YPL008W LOT5P34234 306 aa3.83□□□□□ -1.8
CHL1YPL008W YPK3P38070 525 aa3.83□□□□□ -1.8
CHL1YPL008W YPT35P38815 214 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W PSD1P39006 500 aa3.83□□□□□ -1.8
CHL1YPL008W SOP4P39543 234 aaPredicted RBP3.83□□□□□ -1.8
CHL1YPL008W SDT1P53078 280 aa3.83□□□□□ -1.8
CHL1YPL008W FRE4P53746 719 aa3.83□□□□□ -1.8
CHL1YPL008W OAZ1Q02803 292 aa3.83□□□□□ -1.8
CHL1YPL008W SNZ1Q03148 297 aa3.83□□□□□ -1.8
CHL1YPL008W CRR1Q05790 422 aa3.83□□□□□ -1.8
CHL1YPL008W TSR2Q06672 205 aaKnown RBP3.83□□□□□ -1.8
CHL1YPL008W MCA1Q08601 432 aa3.83□□□□□ -1.8
CHL1YPL008W PST1Q12355 444 aa3.83□□□□□ -1.8
CHL1YPL008W FPS1P23900 669 aa3.82□□□□□ -1.8
CHL1YPL008W RRP7P25368 297 aaPredicted RBP3.82□□□□□ -1.8
CHL1YPL008W NTG1P31378 399 aa3.82□□□□□ -1.8
CHL1YPL008W ATP11P32453 318 aa3.82□□□□□ -1.8
CHL1YPL008W SEC17P32602 292 aa3.82□□□□□ -1.8
CHL1YPL008W NPL6P32832 435 aa3.82□□□□□ -1.8
CHL1YPL008W SSO1P32867 290 aa3.82□□□□□ -1.8
CHL1YPL008W GGC1P38988 300 aa3.82□□□□□ -1.8
CHL1YPL008W ERG10P41338 398 aaKnown RBP3.82□□□□□ -1.8
CHL1YPL008W NQM1P53228 333 aaPredicted RBP3.82□□□□□ -1.8
CHL1YPL008W YKR005CQ02203 525 aa3.82□□□□□ -1.8
CHL1YPL008W YKR011CQ02209 353 aa3.82□□□□□ -1.8
CHL1YPL008W GAD1Q04792 585 aa3.82□□□□□ -1.8
CHL1YPL008W MCM21Q06675 368 aa3.82□□□□□ -1.8
CHL1YPL008W YOL131WQ08270 108 aa3.82□□□□□ -1.8
CHL1YPL008W RGT2Q12300 763 aa3.82□□□□□ -1.8
CHL1YPL008W TY1A-NL1Q12391 440 aaKnown RBP3.82□□□□□ -1.8
CHL1YPL008W SNF8Q12483 233 aa3.82□□□□□ -1.8
CHL1YPL008W RED1P14291 827 aa3.82□□□□□ -1.8
CHL1YPL008W TFS1P14306 219 aa3.82□□□□□ -1.8
CHL1YPL008W HIR2P32480 875 aa3.82□□□□□ -1.8
CHL1YPL008W PET127P32606 800 aa3.82□□□□□ -1.8
CHL1YPL008W GDH2P33327 1092 aaKnown RBP3.82□□□□□ -1.8
CHL1YPL008W TPO5P36029 618 aa3.82□□□□□ -1.8
CHL1YPL008W SOL2P37262 315 aa3.82□□□□□ -1.8
CHL1YPL008W UBS1P38290 277 aa3.82□□□□□ -1.8
CHL1YPL008W INM1P38710 295 aa3.82□□□□□ -1.8
CHL1YPL008W IPT1P38954 527 aa3.82□□□□□ -1.8
CHL1YPL008W SPO73P40031 143 aa3.82□□□□□ -1.8
CHL1YPL008W AVT6P40074 448 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms