RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C TRM112P53738 135 aaPredicted RBP2.11□□□□□ -2.07
RPB11YOL005C ERO1Q03103 563 aa2.11□□□□□ -2.07
RPB11YOL005C RTN1Q04947 295 aaKnown RBP2.11□□□□□ -2.07
RPB11YOL005C YDR341CQ05506 607 aaKnown RBP2.11□□□□□ -2.07
RPB11YOL005C ECM7Q06200 448 aa2.11□□□□□ -2.07
RPB11YOL005C MHR1Q06630 226 aa2.11□□□□□ -2.07
RPB11YOL005C MDM36Q06820 579 aa2.11□□□□□ -2.07
RPB11YOL005C CUE5Q08412 411 aaKnown RBP2.11□□□□□ -2.07
RPB11YOL005C SNU66Q12420 587 aaPredicted RBP2.11□□□□□ -2.07
RPB11YOL005C HTZ1Q12692 134 aaKnown RBP2.11□□□□□ -2.07
RPB11YOL005C YPK9Q12697 1472 aa2.11□□□□□ -2.07
RPB11YOL005C ESC1Q03661 1658 aaKnown RBP2.11□□□□□ -2.07
RPB11YOL005C CDC25P04821 1589 aa2.1□□□□□ -2.07
RPB11YOL005C TRM732Q03496 1420 aa2.1□□□□□ -2.07
RPB11YOL005C MMS1Q06211 1407 aa2.1□□□□□ -2.07
RPB11YOL005C RPO31P04051 1460 aa2.1□□□□□ -2.07
RPB11YOL005C PAN1P32521 1480 aa2.1□□□□□ -2.07
RPB11YOL005C MSI1P13712 422 aa2.1□□□□□ -2.07
RPB11YOL005C PHA2P32452 334 aa2.1□□□□□ -2.07
RPB11YOL005C UTH1P36135 365 aa2.1□□□□□ -2.07
RPB11YOL005C KAP104P38217 918 aaKnown RBP2.1□□□□□ -2.07
RPB11YOL005C RTC2P38279 296 aa2.1□□□□□ -2.07
RPB11YOL005C LRP1P38801 184 aaKnown RBP2.1□□□□□ -2.07
RPB11YOL005C PAC11P40960 533 aa2.1□□□□□ -2.07
RPB11YOL005C YIP5P53108 310 aa2.1□□□□□ -2.07
RPB11YOL005C YGR117CP53270 476 aa2.1□□□□□ -2.07
RPB11YOL005C VPS9P54787 451 aa2.1□□□□□ -2.07
RPB11YOL005C HAL1Q01766 294 aa2.1□□□□□ -2.07
RPB11YOL005C MEH1Q02205 184 aa2.1□□□□□ -2.07
RPB11YOL005C YMR102CQ03177 834 aa2.1□□□□□ -2.07
RPB11YOL005C YMR027WQ04371 470 aa2.1□□□□□ -2.07
RPB11YOL005C ASA1Q06822 443 aa2.1□□□□□ -2.07
RPB11YOL005C NSE1Q07913 336 aa2.1□□□□□ -2.07
RPB11YOL005C LOT6Q07923 191 aa2.1□□□□□ -2.07
RPB11YOL005C SMC5Q08204 1093 aa2.1□□□□□ -2.07
RPB11YOL005C FDH1Q08911 376 aa2.1□□□□□ -2.07
RPB11YOL005C SMF3Q12078 473 aaPredicted RBP2.1□□□□□ -2.07
RPB11YOL005C YGK3Q12222 375 aaPredicted RBP2.1□□□□□ -2.07
RPB11YOL005C YCR024C-BQ3E7Z8 88 aa2.1□□□□□ -2.07
RPB11YOL005C MMS22Q06164 1454 aa2.09□□□□□ -2.07
RPB11YOL005C SSC1P0CS90 654 aaKnown RBP2.09□□□□□ -2.07
RPB11YOL005C RPL1AP0CX43 217 aaKnown RBP2.09□□□□□ -2.07
RPB11YOL005C RPL1BP0CX44 217 aaKnown RBP2.09□□□□□ -2.07
RPB11YOL005C ARF1P11076 181 aaKnown RBP2.09□□□□□ -2.07
RPB11YOL005C IES6P32617 166 aa2.09□□□□□ -2.07
RPB11YOL005C YEF1P32622 495 aa2.09□□□□□ -2.07
RPB11YOL005C SKT5P34226 696 aa2.09□□□□□ -2.07
RPB11YOL005C SPT10P35208 640 aa2.09□□□□□ -2.07
RPB11YOL005C SPP381P38282 291 aaPredicted RBP2.09□□□□□ -2.07
RPB11YOL005C MIG3P39943 394 aa2.09□□□□□ -2.07
RPB11YOL005C OXA1P39952 402 aa2.09□□□□□ -2.07
RPB11YOL005C YNL208WP40159 199 aaKnown RBP2.09□□□□□ -2.07
RPB11YOL005C UTP18P40362 594 aaPredicted RBP2.09□□□□□ -2.07
RPB11YOL005C DFG10P40526 253 aa2.09□□□□□ -2.07
RPB11YOL005C EGT2P42835 1041 aa2.09□□□□□ -2.07
RPB11YOL005C YGL039WP53183 348 aaKnown RBP2.09□□□□□ -2.07
RPB11YOL005C CRH1P53301 507 aa2.09□□□□□ -2.07
RPB11YOL005C YLR152CP54072 576 aa2.09□□□□□ -2.07
RPB11YOL005C TDA1Q03533 586 aa2.09□□□□□ -2.07
RPB11YOL005C RNH203Q12338 110 aa2.09□□□□□ -2.07
RPB11YOL005C JID1Q12350 301 aa2.09□□□□□ -2.07
RPB11YOL005C YOP1Q12402 180 aa2.09□□□□□ -2.07
RPB11YOL005C MYO2P19524 1574 aaKnown RBP2.09□□□□□ -2.08
RPB11YOL005C LTE1P07866 1435 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-LR1P0C2J3 1770 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-FP0CX63 1770 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-GR2P0CX64 1770 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-CP25384 1770 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-DR2Q03494 1770 aa2.08□□□□□ -2.08
RPB11YOL005C TY1B-DR1Q03855 1755 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-DR3Q07791 1770 aaKnown RBP2.08□□□□□ -2.08
RPB11YOL005C TY2B-OR1Q12113 1770 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-DR1Q12472 1770 aa2.08□□□□□ -2.08
RPB11YOL005C TY2B-OR2Q12501 1770 aa2.08□□□□□ -2.08
RPB11YOL005C STU1P38198 1513 aa2.08□□□□□ -2.08
RPB11YOL005C RKR1Q04781 1562 aa2.08□□□□□ -2.08
RPB11YOL005C AAT2P23542 418 aaKnown RBP2.08□□□□□ -2.08
RPB11YOL005C NUP2P32499 720 aa2.08□□□□□ -2.08
RPB11YOL005C YHK8P38776 514 aa2.08□□□□□ -2.08
RPB11YOL005C GEP4P38812 185 aa2.08□□□□□ -2.08
RPB11YOL005C WSS1P38838 269 aa2.08□□□□□ -2.08
RPB11YOL005C SEC28P40509 296 aaKnown RBP2.08□□□□□ -2.08
RPB11YOL005C EPL1P43572 832 aa2.08□□□□□ -2.08
RPB11YOL005C YDR541CQ03049 344 aa2.08□□□□□ -2.08
RPB11YOL005C PRM6Q04705 352 aa2.08□□□□□ -2.08
RPB11YOL005C YDR061WQ12298 539 aa2.08□□□□□ -2.08
RPB11YOL005C TY1B-BRQ12193 1756 aa2.08□□□□□ -2.08
RPB11YOL005C TY1B-GR3Q12316 1755 aa2.08□□□□□ -2.08
RPB11YOL005C TY1B-ORQ92393 1755 aa2.08□□□□□ -2.08
RPB11YOL005C TOP2P06786 1428 aaKnown RBP2.08□□□□□ -2.08
RPB11YOL005C MET5P47169 1442 aa2.08□□□□□ -2.08
RPB11YOL005C RPL12AP0CX53 165 aaKnown RBP2.07□□□□□ -2.08
RPB11YOL005C RPL12BP0CX54 165 aa2.07□□□□□ -2.08
RPB11YOL005C RRP7P25368 297 aaPredicted RBP2.07□□□□□ -2.08
RPB11YOL005C PRR1P28708 518 aa2.07□□□□□ -2.08
RPB11YOL005C HXT1P32465 570 aa2.07□□□□□ -2.08
RPB11YOL005C RAD5P32849 1169 aaPredicted RBP2.07□□□□□ -2.08
RPB11YOL005C GPX2P38143 162 aa2.07□□□□□ -2.08
RPB11YOL005C JEM1P40358 645 aa2.07□□□□□ -2.08
RPB11YOL005C STE24P47154 453 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms