RNA–Protein interactions for RNA: YNR010W

CSE2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene CSE2, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSE2	YNR010W	AIP1	P46680	615 aa	Known RBP	0.92	□□□□□ -2.26
CSE2	YNR010W	ZRG17	P53735	605 aa		0.92	□□□□□ -2.26
CSE2	YNR010W	OCA2	P53949	197 aa		0.92	□□□□□ -2.26
CSE2	YNR010W	DIS3	Q08162	1001 aa	Known RBP	0.92	□□□□□ -2.26
CSE2	YNR010W	FCY22	Q12119	530 aa		0.92	□□□□□ -2.26
CSE2	YNR010W	YPR096C	O13587	100 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	HOM3	P10869	527 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	ARO3	P14843	370 aa	Known RBP	0.91	□□□□□ -2.26
CSE2	YNR010W	GIT1	P25346	518 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	CHA1	P25379	360 aa	Known RBP	0.91	□□□□□ -2.26
CSE2	YNR010W	SRB2	P34162	210 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	HEL1	P36113	551 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	SMP1	P38128	452 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	ECM34	P38728	170 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	ABM1	P47146	123 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	STD1	Q02794	444 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	RRP45	Q05636	305 aa	Known RBP	0.91	□□□□□ -2.26
CSE2	YNR010W	ECM7	Q06200	448 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	BUG1	Q12191	341 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	YDL199C	Q12407	687 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	RTN2	Q12443	393 aa		0.91	□□□□□ -2.26
CSE2	YNR010W	HTZ1	Q12692	134 aa	Known RBP	0.91	□□□□□ -2.26
CSE2	YNR010W	ASP3-2	P0CX77	362 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	ASP3-3	P0CX78	362 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	ASP3-4	P0CX79	362 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	ASP3-1	P0CZ17	362 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	FRM2	P37261	193 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	WSC4	P38739	605 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	TRR2	P38816	342 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	VEL1	P53058	206 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	YGL138C	P53122	345 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	RRP46	P53256	223 aa	Predicted RBP	0.9	□□□□□ -2.27
CSE2	YNR010W	MMT1	Q03218	510 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	FAR10	Q06001	478 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	COG4	Q06096	861 aa		0.9	□□□□□ -2.27
CSE2	YNR010W	AUS1	Q08409	1394 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	SCH9	P11792	824 aa	Known RBP	0.89	□□□□□ -2.27
CSE2	YNR010W	ZIP1	P31111	875 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	UTR5	P32630	166 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	RAD5	P32849	1169 aa	Predicted RBP	0.89	□□□□□ -2.27
CSE2	YNR010W	GPX2	P38143	162 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	MMS4	P38257	691 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	NTC20	P38302	140 aa	Predicted RBP	0.89	□□□□□ -2.27
CSE2	YNR010W	LSM12	P38828	187 aa	Known RBP	0.89	□□□□□ -2.27
CSE2	YNR010W	COS4	P43542	379 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	RRN9	P53437	365 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	VAC7	P53950	1165 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	KAP120	Q02932	1032 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	TAF11	Q04226	346 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	YDR115W	Q04598	105 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	YLR177W	Q06251	628 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	DDC1	Q08949	612 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	POM152	P39685	1337 aa		0.89	□□□□□ -2.27
CSE2	YNR010W	FUS3	P16892	353 aa	Known RBP	0.88	□□□□□ -2.27
CSE2	YNR010W	URA4	P20051	364 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	EPT1	P22140	391 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	ANP1	P32629	500 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	TOA1	P32773	286 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	TOA2	P32774	122 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	ECM8	P38246	354 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	GPI16	P38875	610 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	SER3	P40054	469 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	ARF3	P40994	183 aa	RIP-Chip data	0.88	□□□□□ -2.27	not detected
CSE2	YNR010W	TOM22	P49334	152 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	PRP38	Q00723	242 aa	Predicted RBP	0.88	□□□□□ -2.27
CSE2	YNR010W	SKO1	Q02100	647 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	INP2	Q03824	705 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	MRX8	Q05473	314 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	RRI2	Q12348	645 aa		0.88	□□□□□ -2.27
CSE2	YNR010W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	RIP-Chip
CSE2	YNR010W	ALG1	P16661	449 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	SRV2	P17555	526 aa	Known RBP	0.87	□□□□□ -2.27
CSE2	YNR010W	CLC1	P17891	233 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	YGP1	P38616	354 aa	Known RBP	0.87	□□□□□ -2.27
CSE2	YNR010W	YPT35	P38815	214 aa	Known RBP	0.87	□□□□□ -2.27
CSE2	YNR010W	UTP9	P38882	575 aa	Known RBP	0.87	□□□□□ -2.27
CSE2	YNR010W	YIL059C	P40520	121 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	PMT5	P52867	743 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	ACL4	Q03771	387 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	ROY1	Q04847	553 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	MSC3	Q05812	728 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	DCS1	Q06151	350 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	MMR1	Q06324	491 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	SRO7	Q12038	1033 aa		0.87	□□□□□ -2.27
CSE2	YNR010W	ATP1	P07251	545 aa	Known RBP	0.86	□□□□□ -2.27
CSE2	YNR010W	SPO23	P33757	523 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	DBP7	P36120	742 aa	Known RBP	0.86	□□□□□ -2.27
CSE2	YNR010W	SDH4	P37298	181 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	RRT13	P40042	185 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	SCC4	P40090	624 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	YJR030C	P47101	745 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	YGR117C	P53270	476 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	MRPL19	P53875	158 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	BNI5	P53890	448 aa	Known RBP	0.86	□□□□□ -2.27
CSE2	YNR010W	SPR6	Q01684	191 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	RPN9	Q04062	393 aa	Known RBP	0.86	□□□□□ -2.27
CSE2	YNR010W	SFM1	Q12314	213 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	LDB17	Q12342	491 aa		0.86	□□□□□ -2.27
CSE2	YNR010W	YRF1-4	O13559	1382 aa		0.85	□□□□□ -2.27
CSE2	YNR010W	OPI3	P05375	206 aa		0.85	□□□□□ -2.27

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