RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C CHA4P43634 648 aa8.15□□□□□ -1.1
RPD3YNL330C IRC18P47056 224 aa8.15□□□□□ -1.1
RPD3YNL330C EXG2P52911 562 aa8.15□□□□□ -1.1
RPD3YNL330C BUD17P53727 317 aa8.15□□□□□ -1.1
RPD3YNL330C TPS1Q00764 495 aaKnown RBP8.15□□□□□ -1.1
RPD3YNL330C FDC1Q03034 503 aa8.15□□□□□ -1.1
RPD3YNL330C YDL129WQ07555 291 aa8.15□□□□□ -1.1
RPD3YNL330C RTN2Q12443 393 aa8.15□□□□□ -1.1
RPD3YNL330C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
RPD3YNL330C COX3P00420 269 aa8.14□□□□□ -1.11
RPD3YNL330C STE7P06784 515 aa8.14□□□□□ -1.11
RPD3YNL330C MET2P08465 486 aa8.14□□□□□ -1.11
RPD3YNL330C ZWF1P11412 505 aaKnown RBP8.14□□□□□ -1.11
RPD3YNL330C KIN2P13186 1147 aaKnown RBP8.14□□□□□ -1.11
RPD3YNL330C HSP30P25619 332 aa8.14□□□□□ -1.11
RPD3YNL330C MKK1P32490 508 aa8.14□□□□□ -1.11
RPD3YNL330C MGM101P32787 269 aaKnown RBP8.14□□□□□ -1.11
RPD3YNL330C PPQ1P32945 549 aa8.14□□□□□ -1.11
RPD3YNL330C MAC1P35192 417 aa8.14□□□□□ -1.11
RPD3YNL330C PIM1P36775 1133 aa8.14□□□□□ -1.11
RPD3YNL330C MNN2P38069 597 aa8.14□□□□□ -1.11
RPD3YNL330C YBR063CP38083 404 aa8.14□□□□□ -1.11
RPD3YNL330C PET100P38958 111 aa8.14□□□□□ -1.11
RPD3YNL330C DOT6P40059 670 aaKnown RBP8.14□□□□□ -1.11
RPD3YNL330C YJL068CP40363 299 aa8.14□□□□□ -1.11
RPD3YNL330C LYS12P40495 371 aaKnown RBP8.14□□□□□ -1.11
RPD3YNL330C MET28P40573 187 aa8.14□□□□□ -1.11
RPD3YNL330C GDS1P41913 522 aa8.14□□□□□ -1.11
RPD3YNL330C MDV1P47025 714 aa8.14□□□□□ -1.11
RPD3YNL330C NBP35P52920 328 aa8.14□□□□□ -1.11
RPD3YNL330C TPN1P53099 579 aa8.14□□□□□ -1.11
RPD3YNL330C ROG1P53118 685 aa8.14□□□□□ -1.11
RPD3YNL330C YGR079WP53249 370 aa8.14□□□□□ -1.11
RPD3YNL330C RBG2P53295 368 aaKnown RBP8.14□□□□□ -1.11
RPD3YNL330C YML108WQ03759 105 aa8.14□□□□□ -1.11
RPD3YNL330C RNH202Q05635 350 aa8.14□□□□□ -1.11
RPD3YNL330C VID22Q05934 901 aa8.14□□□□□ -1.11
RPD3YNL330C SYO1Q07395 620 aa8.14□□□□□ -1.11
RPD3YNL330C DCI1Q08558 271 aa8.14□□□□□ -1.11
RPD3YNL330C RTT10Q08924 1013 aa8.14□□□□□ -1.11
RPD3YNL330C YDR061WQ12298 539 aa8.14□□□□□ -1.11
RPD3YNL330C LAG2Q92325 660 aa8.14□□□□□ -1.11
RPD3YNL330C TOM1Q03280 3268 aa8.13□□□□□ -1.11
RPD3YNL330C YKR104WP0CE69 306 aa8.13□□□□□ -1.11
RPD3YNL330C CHL1P22516 861 aaPredicted RBP8.13□□□□□ -1.11
RPD3YNL330C TAT2P38967 592 aa8.13□□□□□ -1.11
RPD3YNL330C CCT6P39079 546 aa8.13□□□□□ -1.11
RPD3YNL330C AIM10P39965 576 aaKnown RBP8.13□□□□□ -1.11
RPD3YNL330C AZF1P41696 914 aa8.13□□□□□ -1.11
RPD3YNL330C MRPS18P42847 217 aa8.13□□□□□ -1.11
RPD3YNL330C PRM10P42946 383 aa8.13□□□□□ -1.11
RPD3YNL330C YFR020WP43600 232 aa8.13□□□□□ -1.11
RPD3YNL330C RRN9P53437 365 aa8.13□□□□□ -1.11
RPD3YNL330C LEE1Q02799 301 aaKnown RBP8.13□□□□□ -1.11
RPD3YNL330C GPN3Q06543 272 aa8.13□□□□□ -1.11
RPD3YNL330C YLR040CQ07988 224 aa8.13□□□□□ -1.11
RPD3YNL330C BAG7Q12128 409 aa8.13□□□□□ -1.11
RPD3YNL330C RAD59Q12223 238 aa8.13□□□□□ -1.11
RPD3YNL330C SFG1Q12507 346 aa8.13□□□□□ -1.11
RPD3YNL330C HMG1P12683 1054 aa8.12□□□□□ -1.11
RPD3YNL330C DIT1P21623 536 aa8.12□□□□□ -1.11
RPD3YNL330C LYP1P32487 611 aa8.12□□□□□ -1.11
RPD3YNL330C SUR1P33300 382 aa8.12□□□□□ -1.11
RPD3YNL330C YKL063CP35725 167 aa8.12□□□□□ -1.11
RPD3YNL330C TEF4P36008 412 aaKnown RBP8.12□□□□□ -1.11
RPD3YNL330C YRO2P38079 344 aa8.12□□□□□ -1.11
RPD3YNL330C PEX28P38848 579 aa8.12□□□□□ -1.11
RPD3YNL330C MLH1P38920 769 aa8.12□□□□□ -1.11
RPD3YNL330C ATG18P43601 500 aa8.12□□□□□ -1.11
RPD3YNL330C MNN5P46982 586 aa8.12□□□□□ -1.11
RPD3YNL330C TDA1Q03533 586 aa8.12□□□□□ -1.11
RPD3YNL330C RQC1Q05468 723 aaKnown RBP8.12□□□□□ -1.11
RPD3YNL330C REX4Q08237 289 aa8.12□□□□□ -1.11
RPD3YNL330C RRG7Q08774 242 aaPredicted RBP8.12□□□□□ -1.11
RPD3YNL330C SUL2Q12325 893 aa8.12□□□□□ -1.11
RPD3YNL330C YEL009C-AA0A023PZF2 135 aa8.11□□□□□ -1.11
RPD3YNL330C SEC2P17065 759 aa8.11□□□□□ -1.11
RPD3YNL330C GRX2P17695 143 aaKnown RBP8.11□□□□□ -1.11
RPD3YNL330C ATG22P25568 528 aa8.11□□□□□ -1.11
RPD3YNL330C THI4P32318 326 aa8.11□□□□□ -1.11
RPD3YNL330C HIS7P33734 552 aaKnown RBP8.11□□□□□ -1.11
RPD3YNL330C TOD6P34219 525 aa8.11□□□□□ -1.11
RPD3YNL330C RRN10P38204 145 aa8.11□□□□□ -1.11
RPD3YNL330C YBR242WP38331 238 aa8.11□□□□□ -1.11
RPD3YNL330C AIM2P39721 246 aa8.11□□□□□ -1.11
RPD3YNL330C RTT105P40063 208 aa8.11□□□□□ -1.11
RPD3YNL330C NUP116Q02630 1113 aa8.11□□□□□ -1.11
RPD3YNL330C TMN2Q04562 672 aa8.11□□□□□ -1.11
RPD3YNL330C PDR8Q06149 701 aa8.11□□□□□ -1.11
RPD3YNL330C YLR173WQ06247 608 aa8.11□□□□□ -1.11
RPD3YNL330C EAF1Q06337 982 aa8.11□□□□□ -1.11
RPD3YNL330C VPS36Q06696 566 aa8.11□□□□□ -1.11
RPD3YNL330C RKM5Q12367 367 aa8.11□□□□□ -1.11
RPD3YNL330C LSO1Q3E827 93 aa8.11□□□□□ -1.11
RPD3YNL330C YOR019WQ99248 730 aa8.11□□□□□ -1.11
RPD3YNL330C SNF6P18888 332 aa8.1□□□□□ -1.11
RPD3YNL330C MBP1P39678 833 aa8.1□□□□□ -1.11
RPD3YNL330C MNT3P40549 630 aa8.1□□□□□ -1.11
RPD3YNL330C RAD17P48581 401 aa8.1□□□□□ -1.11
RPD3YNL330C NUP57P48837 541 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms