RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C HXT2P23585 541 aa3.09□□□□□ -1.91
WHI3YNL197C ZUO1P32527 433 aaKnown RBP3.09□□□□□ -1.91
WHI3YNL197C COX13P32799 129 aa3.09□□□□□ -1.91
WHI3YNL197C MRP4P32902 394 aa3.09□□□□□ -1.91
WHI3YNL197C SPT10P35208 640 aa3.09□□□□□ -1.91
WHI3YNL197C MCR1P36060 302 aaKnown RBP3.09□□□□□ -1.91
WHI3YNL197C CHK1P38147 527 aa3.09□□□□□ -1.91
WHI3YNL197C YMR317WQ04893 1140 aa3.09□□□□□ -1.91
WHI3YNL197C MSC3Q05812 728 aa3.09□□□□□ -1.91
WHI3YNL197C YOP1Q12402 180 aa3.09□□□□□ -1.91
WHI3YNL197C VAM7P32912 316 aa3.09□□□□□ -1.92
WHI3YNL197C DOA1P36037 715 aa3.09□□□□□ -1.92
WHI3YNL197C ATP3P38077 311 aaKnown RBP3.09□□□□□ -1.92
WHI3YNL197C KRE9P39005 276 aa3.09□□□□□ -1.92
WHI3YNL197C PCL7P40186 285 aa3.09□□□□□ -1.92
WHI3YNL197C HST1P53685 503 aa3.09□□□□□ -1.92
WHI3YNL197C ERV25P54837 211 aaKnown RBP3.09□□□□□ -1.92
WHI3YNL197C AIM33Q04516 312 aa3.09□□□□□ -1.92
WHI3YNL197C CEX1Q12453 761 aa3.09□□□□□ -1.92
WHI3YNL197C POM152P39685 1337 aa3.08□□□□□ -1.92
WHI3YNL197C YBL028CP38202 106 aa3.08□□□□□ -1.92
WHI3YNL197C LYS12P40495 371 aaKnown RBP3.08□□□□□ -1.92
WHI3YNL197C SPR6Q01684 191 aa3.08□□□□□ -1.92
WHI3YNL197C FSH3Q99369 266 aa3.08□□□□□ -1.92
WHI3YNL197C MAS2P11914 482 aa3.07□□□□□ -1.92
WHI3YNL197C GAL3P13045 520 aa3.07□□□□□ -1.92
WHI3YNL197C HMX1P32339 317 aa3.07□□□□□ -1.92
WHI3YNL197C MUD1P32605 298 aaKnown RBP3.07□□□□□ -1.92
WHI3YNL197C SBE22P38814 852 aa3.07□□□□□ -1.92
WHI3YNL197C MTC6P38849 526 aa3.07□□□□□ -1.92
WHI3YNL197C SSO2P39926 295 aa3.07□□□□□ -1.92
WHI3YNL197C YIL067CP40514 678 aa3.07□□□□□ -1.92
WHI3YNL197C MTM1P53320 366 aa3.07□□□□□ -1.92
WHI3YNL197C CRZ1P53968 678 aa3.07□□□□□ -1.92
WHI3YNL197C YMR310CQ04867 317 aaPredicted RBP3.07□□□□□ -1.92
WHI3YNL197C MDM36Q06820 579 aa3.07□□□□□ -1.92
WHI3YNL197C YMR230W-AQ3E7B5 62 aa3.07□□□□□ -1.92
WHI3YNL197C VPS63O13549 108 aa3.07□□□□□ -1.92
WHI3YNL197C CBP2P03874 630 aaPredicted RBP3.07□□□□□ -1.92
WHI3YNL197C FAR1P21268 830 aa3.07□□□□□ -1.92
WHI3YNL197C KAR9P32526 644 aa3.07□□□□□ -1.92
WHI3YNL197C AIM20P40451 204 aa3.07□□□□□ -1.92
WHI3YNL197C PRM5P40476 318 aa3.07□□□□□ -1.92
WHI3YNL197C SNL1P40548 159 aa3.07□□□□□ -1.92
WHI3YNL197C LOC1P43586 204 aaPredicted RBP3.07□□□□□ -1.92
WHI3YNL197C RRP46P53256 223 aaPredicted RBP3.07□□□□□ -1.92
WHI3YNL197C VTI1Q04338 217 aa3.07□□□□□ -1.92
WHI3YNL197C CUR1Q06469 252 aa3.07□□□□□ -1.92
WHI3YNL197C GAT3Q07928 141 aa3.07□□□□□ -1.92
WHI3YNL197C YLR108CQ12259 485 aa3.07□□□□□ -1.92
WHI3YNL197C YOR338WQ99326 363 aa3.07□□□□□ -1.92
WHI3YNL197C TRP1P00912 224 aa3.06□□□□□ -1.92
WHI3YNL197C CKI1P20485 582 aa3.06□□□□□ -1.92
WHI3YNL197C CPR4P25334 318 aa3.06□□□□□ -1.92
WHI3YNL197C DPH5P32469 300 aaPredicted RBP3.06□□□□□ -1.92
WHI3YNL197C ALP1P38971 573 aa3.06□□□□□ -1.92
WHI3YNL197C NCA3P46955 337 aa3.06□□□□□ -1.92
WHI3YNL197C YHC3P47040 408 aa3.06□□□□□ -1.92
WHI3YNL197C PPT2Q12036 173 aa3.06□□□□□ -1.92
WHI3YNL197C ERV2Q12284 196 aa3.06□□□□□ -1.92
WHI3YNL197C SPO24Q3E752 67 aa3.06□□□□□ -1.92
WHI3YNL197C CDC37P06101 506 aaKnown RBP3.05□□□□□ -1.92
WHI3YNL197C CLN3P13365 580 aa3.05□□□□□ -1.92
WHI3YNL197C FMP46P36141 133 aaKnown RBP3.05□□□□□ -1.92
WHI3YNL197C YHK8P38776 514 aa3.05□□□□□ -1.92
WHI3YNL197C CCT4P39078 528 aaKnown RBP3.05□□□□□ -1.92
WHI3YNL197C SMP3Q04174 516 aa3.05□□□□□ -1.92
WHI3YNL197C ARR1Q06596 294 aa3.05□□□□□ -1.92
WHI3YNL197C ESA1Q08649 445 aa3.05□□□□□ -1.92
WHI3YNL197C YRM1Q12340 786 aa3.05□□□□□ -1.92
WHI3YNL197C RRP36Q12481 300 aaPredicted RBP3.05□□□□□ -1.92
WHI3YNL197C RNR2P09938 399 aaKnown RBP3.05□□□□□ -1.92
WHI3YNL197C RPS8AP0CX39 200 aaKnown RBP3.05□□□□□ -1.92
WHI3YNL197C RPS8BP0CX40 200 aaKnown RBP3.05□□□□□ -1.92
WHI3YNL197C RFS1P38234 210 aaKnown RBP3.05□□□□□ -1.92
WHI3YNL197C RTT103Q05543 409 aa3.05□□□□□ -1.92
WHI3YNL197C INO80P53115 1489 aa3.05□□□□□ -1.92
WHI3YNL197C MXR2P25566 168 aa3.04□□□□□ -1.92
WHI3YNL197C EFB1P32471 206 aaKnown RBP3.04□□□□□ -1.92
WHI3YNL197C TIR2P33890 251 aa3.04□□□□□ -1.92
WHI3YNL197C MRPL40P36534 297 aa3.04□□□□□ -1.92
WHI3YNL197C ATG7P38862 630 aa3.04□□□□□ -1.92
WHI3YNL197C PRP39P39682 629 aaKnown RBP3.04□□□□□ -1.92
WHI3YNL197C YMR134WP40207 237 aa3.04□□□□□ -1.92
WHI3YNL197C TIP41Q12199 356 aa3.04□□□□□ -1.92
WHI3YNL197C YDR262WQ12331 272 aa3.04□□□□□ -1.92
WHI3YNL197C YCR024C-BQ3E7Z8 88 aa3.04□□□□□ -1.92
WHI3YNL197C DET1Q99288 334 aaKnown RBP3.04□□□□□ -1.92
WHI3YNL197C RPC40P07703 335 aaKnown RBP3.03□□□□□ -1.92
WHI3YNL197C GCD2P12754 651 aaPredicted RBP3.03□□□□□ -1.92
WHI3YNL197C UTR1P21373 530 aa3.03□□□□□ -1.92
WHI3YNL197C PET18P25362 215 aa3.03□□□□□ -1.92
WHI3YNL197C PRO3P32263 286 aaKnown RBP3.03□□□□□ -1.92
WHI3YNL197C PPQ1P32945 549 aa3.03□□□□□ -1.92
WHI3YNL197C MRPS5P33759 307 aa3.03□□□□□ -1.92
WHI3YNL197C GEP4P38812 185 aa3.03□□□□□ -1.92
WHI3YNL197C MNN9P39107 395 aaKnown RBP3.03□□□□□ -1.92
WHI3YNL197C YFL067WP43537 175 aa3.03□□□□□ -1.92
WHI3YNL197C RIB4P50861 169 aaPredicted RBP3.03□□□□□ -1.92
WHI3YNL197C MRM2P53123 320 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms