RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W VHS2P40463 436 aa2.02□□□□□ -2.09
DDR48YMR173W YGR117CP53270 476 aa2.02□□□□□ -2.09
DDR48YMR173W HST1P53685 503 aa2.02□□□□□ -2.09
DDR48YMR173W OCA2P53949 197 aa2.02□□□□□ -2.09
DDR48YMR173W YPL107WQ02873 248 aa2.02□□□□□ -2.09
DDR48YMR173W HOT1Q03213 719 aa2.02□□□□□ -2.09
DDR48YMR173W YLR287CQ05881 355 aa2.02□□□□□ -2.09
DDR48YMR173W MCH1Q07376 486 aa2.02□□□□□ -2.09
DDR48YMR173W RFM1Q12192 310 aa2.02□□□□□ -2.09
DDR48YMR173W ATP1P07251 545 aaKnown RBP2.01□□□□□ -2.09
DDR48YMR173W SSC1P0CS90 654 aaKnown RBP2.01□□□□□ -2.09
DDR48YMR173W ALG1P16661 449 aa2.01□□□□□ -2.09
DDR48YMR173W TPS2P31688 896 aaKnown RBP2.01□□□□□ -2.09
DDR48YMR173W FMT1P32785 401 aa2.01□□□□□ -2.09
DDR48YMR173W ASC1P38011 319 aaKnown RBP2.01□□□□□ -2.09
DDR48YMR173W SLM4P38247 162 aa2.01□□□□□ -2.09
DDR48YMR173W STN1P38960 494 aa2.01□□□□□ -2.09
DDR48YMR173W RRP46P53256 223 aaPredicted RBP2.01□□□□□ -2.09
DDR48YMR173W PRP3Q03338 469 aaPredicted RBP2.01□□□□□ -2.09
DDR48YMR173W YLR345WQ06137 509 aa2.01□□□□□ -2.09
DDR48YMR173W FCY22Q12119 530 aa2.01□□□□□ -2.09
DDR48YMR173W YDL199CQ12407 687 aa2.01□□□□□ -2.09
DDR48YMR173W HTZ1Q12692 134 aaKnown RBP2.01□□□□□ -2.09
DDR48YMR173W GIT1P25346 518 aa2□□□□□ -2.09
DDR48YMR173W URA7P28274 579 aaKnown RBP2□□□□□ -2.09
DDR48YMR173W SKT5P34226 696 aa2□□□□□ -2.09
DDR48YMR173W PFS1P38872 237 aa2□□□□□ -2.09
DDR48YMR173W CAK1P43568 368 aaPredicted RBP2□□□□□ -2.09
DDR48YMR173W KEG1P43614 200 aa2□□□□□ -2.09
DDR48YMR173W YGR067CP53243 804 aa2□□□□□ -2.09
DDR48YMR173W BNI5P53890 448 aaKnown RBP2□□□□□ -2.09
DDR48YMR173W RPL21AQ02753 160 aaKnown RBP2□□□□□ -2.09
DDR48YMR173W RPL21BQ12672 160 aaKnown RBP2□□□□□ -2.09
DDR48YMR173W AFI1Q99222 893 aa2□□□□□ -2.09
DDR48YMR173W INH1P01097 85 aa1.99□□□□□ -2.09
DDR48YMR173W DST1P07273 309 aa1.99□□□□□ -2.09
DDR48YMR173W ARO3P14843 370 aaKnown RBP1.99□□□□□ -2.09
DDR48YMR173W ADK2P26364 225 aa1.99□□□□□ -2.09
DDR48YMR173W HSP104P31539 908 aaKnown RBP1.99□□□□□ -2.09
DDR48YMR173W IME2P32581 645 aa1.99□□□□□ -2.09
DDR48YMR173W SKN1P33336 771 aa1.99□□□□□ -2.09
DDR48YMR173W MCR1P36060 302 aaKnown RBP1.99□□□□□ -2.09
DDR48YMR173W STP2P38704 541 aa1.99□□□□□ -2.09
DDR48YMR173W MMF1P40185 145 aaKnown RBP1.99□□□□□ -2.09
DDR48YMR173W GPD2P41911 440 aaKnown RBP1.99□□□□□ -2.09
DDR48YMR173W STE24P47154 453 aa1.99□□□□□ -2.09
DDR48YMR173W SRB7P47822 140 aa1.99□□□□□ -2.09
DDR48YMR173W MDM1Q01846 1127 aa1.99□□□□□ -2.09
DDR48YMR173W VPS72Q03388 795 aa1.99□□□□□ -2.09
DDR48YMR173W YMR155WQ03795 547 aa1.99□□□□□ -2.09
DDR48YMR173W YDR341CQ05506 607 aaKnown RBP1.99□□□□□ -2.09
DDR48YMR173W SLF1Q12034 447 aaKnown RBP1.99□□□□□ -2.09
DDR48YMR173W MCT1Q12283 360 aa1.99□□□□□ -2.09
DDR48YMR173W MAS2P11914 482 aa1.98□□□□□ -2.09
DDR48YMR173W WSS1P38838 269 aa1.98□□□□□ -2.09
DDR48YMR173W PEX22P39718 180 aa1.98□□□□□ -2.09
DDR48YMR173W YER079WP40052 210 aaKnown RBP1.98□□□□□ -2.09
DDR48YMR173W SEH1P53011 349 aaKnown RBP1.98□□□□□ -2.09
DDR48YMR173W RRN9P53437 365 aa1.98□□□□□ -2.09
DDR48YMR173W SPR6Q01684 191 aa1.98□□□□□ -2.09
DDR48YMR173W YDR131CQ03899 556 aa1.98□□□□□ -2.09
DDR48YMR173W NSE1Q07913 336 aa1.98□□□□□ -2.09
DDR48YMR173W TOA2P32774 122 aa1.97□□□□□ -2.09
DDR48YMR173W SPO23P33757 523 aa1.97□□□□□ -2.09
DDR48YMR173W HEL1P36113 551 aa1.97□□□□□ -2.09
DDR48YMR173W GPX2P38143 162 aa1.97□□□□□ -2.09
DDR48YMR173W INM1P38710 295 aa1.97□□□□□ -2.09
DDR48YMR173W ENT5Q03769 411 aaKnown RBP1.97□□□□□ -2.09
DDR48YMR173W YHC1Q05900 231 aaKnown RBP1.97□□□□□ -2.09
DDR48YMR173W SFM1Q12314 213 aa1.97□□□□□ -2.09
DDR48YMR173W HIF1Q12373 385 aa1.97□□□□□ -2.09
DDR48YMR173W PCL9Q12477 304 aa1.97□□□□□ -2.09
DDR48YMR173W RPS19AP07280 144 aaKnown RBP1.96□□□□□ -2.1
DDR48YMR173W RPS19BP07281 144 aaPredicted RBP1.96□□□□□ -2.1
DDR48YMR173W PUT4P15380 627 aa1.96□□□□□ -2.1
DDR48YMR173W CMK2P22517 447 aa1.96□□□□□ -2.1
DDR48YMR173W SOL2P37262 315 aa1.96□□□□□ -2.1
DDR48YMR173W ZTA1P38230 334 aaKnown RBP1.96□□□□□ -2.1
DDR48YMR173W RCK2P38623 610 aa1.96□□□□□ -2.1
DDR48YMR173W FRT2P39734 528 aa1.96□□□□□ -2.1
DDR48YMR173W SER3P40054 469 aa1.96□□□□□ -2.1
DDR48YMR173W TOS2P50078 622 aa1.96□□□□□ -2.1
DDR48YMR173W VAC7P53950 1165 aa1.96□□□□□ -2.1
DDR48YMR173W PRP38Q00723 242 aaPredicted RBP1.96□□□□□ -2.1
DDR48YMR173W YOP1Q12402 180 aa1.96□□□□□ -2.1
DDR48YMR173W MEX67Q99257 599 aaKnown RBP1.96□□□□□ -2.1
DDR48YMR173W YOL085CQ99345 113 aa1.96□□□□□ -2.1
DDR48YMR173W CDC21P06785 304 aa1.95□□□□□ -2.1
DDR48YMR173W RPS18AP0CX55 146 aaKnown RBP1.95□□□□□ -2.1
DDR48YMR173W RPS18BP0CX56 146 aaPredicted RBP1.95□□□□□ -2.1
DDR48YMR173W CPR2P23285 205 aa1.95□□□□□ -2.1
DDR48YMR173W MSP1P28737 362 aa1.95□□□□□ -2.1
DDR48YMR173W TIR2P33890 251 aa1.95□□□□□ -2.1
DDR48YMR173W BYE1P36106 594 aa1.95□□□□□ -2.1
DDR48YMR173W PRY2P36110 329 aa1.95□□□□□ -2.1
DDR48YMR173W JNM1P36224 373 aa1.95□□□□□ -2.1
DDR48YMR173W YER184CP39961 794 aa1.95□□□□□ -2.1
DDR48YMR173W ASN2P49090 572 aaKnown RBP1.95□□□□□ -2.1
DDR48YMR173W AEP3Q12089 606 aa1.95□□□□□ -2.1
DDR48YMR173W RRG1Q12167 365 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms