RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C SIM1P40472 476 aa3.37□□□□□ -1.87
PML39YML107C LCB3P47013 409 aa3.37□□□□□ -1.87
PML39YML107C AIM24P47127 394 aa3.37□□□□□ -1.87
PML39YML107C YGL039WP53183 348 aaKnown RBP3.37□□□□□ -1.87
PML39YML107C SMC5Q08204 1093 aa3.37□□□□□ -1.87
PML39YML107C JID1Q12350 301 aa3.37□□□□□ -1.87
PML39YML107C PAR32Q12515 295 aaKnown RBP3.37□□□□□ -1.87
PML39YML107C YPR117WQ06116 2489 aa3.37□□□□□ -1.87
PML39YML107C PIS1P06197 220 aaKnown RBP3.36□□□□□ -1.87
PML39YML107C MDL1P33310 695 aa3.36□□□□□ -1.87
PML39YML107C SKT5P34226 696 aa3.36□□□□□ -1.87
PML39YML107C STP2P38704 541 aa3.36□□□□□ -1.87
PML39YML107C AIM10P39965 576 aaKnown RBP3.36□□□□□ -1.87
PML39YML107C EFM4P40516 257 aa3.36□□□□□ -1.87
PML39YML107C CHS6P40955 746 aa3.36□□□□□ -1.87
PML39YML107C PAC11P40960 533 aa3.36□□□□□ -1.87
PML39YML107C YFR057WP43625 151 aa3.36□□□□□ -1.87
PML39YML107C YMR102CQ03177 834 aa3.36□□□□□ -1.87
PML39YML107C RTN1Q04947 295 aaKnown RBP3.36□□□□□ -1.87
PML39YML107C RIF2Q06208 395 aa3.36□□□□□ -1.87
PML39YML107C YGK3Q12222 375 aaPredicted RBP3.36□□□□□ -1.87
PML39YML107C AHC1Q12433 566 aa3.36□□□□□ -1.87
PML39YML107C HTZ1Q12692 134 aaKnown RBP3.36□□□□□ -1.87
PML39YML107C POM152P39685 1337 aa3.36□□□□□ -1.87
PML39YML107C YEF1P32622 495 aa3.35□□□□□ -1.87
PML39YML107C DOA1P36037 715 aa3.35□□□□□ -1.87
PML39YML107C QDR3P38227 689 aa3.35□□□□□ -1.87
PML39YML107C BIR1P47134 954 aa3.35□□□□□ -1.87
PML39YML107C YGR117CP53270 476 aa3.35□□□□□ -1.87
PML39YML107C TRM112P53738 135 aaPredicted RBP3.35□□□□□ -1.87
PML39YML107C YDR541CQ03049 344 aa3.35□□□□□ -1.87
PML39YML107C CUE5Q08412 411 aaKnown RBP3.35□□□□□ -1.87
PML39YML107C OPI3P05375 206 aa3.34□□□□□ -1.87
PML39YML107C TPK3P05986 398 aa3.34□□□□□ -1.87
PML39YML107C RPL1AP0CX43 217 aaKnown RBP3.34□□□□□ -1.87
PML39YML107C RPL1BP0CX44 217 aaKnown RBP3.34□□□□□ -1.87
PML39YML107C MSI1P13712 422 aa3.34□□□□□ -1.87
PML39YML107C DPH5P32469 300 aaPredicted RBP3.34□□□□□ -1.87
PML39YML107C YSC83P32792 385 aa3.34□□□□□ -1.87
PML39YML107C KAP104P38217 918 aaKnown RBP3.34□□□□□ -1.87
PML39YML107C TIS11P47977 285 aa3.34□□□□□ -1.87
PML39YML107C YLR152CP54072 576 aa3.34□□□□□ -1.87
PML39YML107C PRM6Q04705 352 aa3.34□□□□□ -1.87
PML39YML107C DOP1Q03921 1698 aa3.33□□□□□ -1.88
PML39YML107C ARF1P11076 181 aaKnown RBP3.33□□□□□ -1.88
PML39YML107C RPB5P20434 215 aa3.33□□□□□ -1.88
PML39YML107C PRR1P28708 518 aa3.33□□□□□ -1.88
PML39YML107C PFF1P38244 976 aa3.33□□□□□ -1.88
PML39YML107C RTC2P38279 296 aa3.33□□□□□ -1.88
PML39YML107C MNL1P38888 796 aa3.33□□□□□ -1.88
PML39YML107C UTP18P40362 594 aaPredicted RBP3.33□□□□□ -1.88
PML39YML107C ECM7Q06200 448 aa3.33□□□□□ -1.88
PML39YML107C SMF3Q12078 473 aaPredicted RBP3.33□□□□□ -1.88
PML39YML107C RNH203Q12338 110 aa3.33□□□□□ -1.88
PML39YML107C AAT2P23542 418 aaKnown RBP3.32□□□□□ -1.88
PML39YML107C NUP2P32499 720 aa3.32□□□□□ -1.88
PML39YML107C SPR1P32603 445 aa3.32□□□□□ -1.88
PML39YML107C RAD5P32849 1169 aaPredicted RBP3.32□□□□□ -1.88
PML39YML107C SPT10P35208 640 aa3.32□□□□□ -1.88
PML39YML107C MIG3P39943 394 aa3.32□□□□□ -1.88
PML39YML107C DFG10P40526 253 aa3.32□□□□□ -1.88
PML39YML107C STE24P47154 453 aa3.32□□□□□ -1.88
PML39YML107C MST27P53176 234 aa3.32□□□□□ -1.88
PML39YML107C HAL1Q01766 294 aa3.32□□□□□ -1.88
PML39YML107C MEH1Q02205 184 aa3.32□□□□□ -1.88
PML39YML107C PRP3Q03338 469 aaPredicted RBP3.32□□□□□ -1.88
PML39YML107C TDA1Q03533 586 aa3.32□□□□□ -1.88
PML39YML107C LIP2Q06005 328 aa3.32□□□□□ -1.88
PML39YML107C NDL1Q06568 189 aa3.32□□□□□ -1.88
PML39YML107C PLP2Q12017 286 aa3.32□□□□□ -1.88
PML39YML107C YOP1Q12402 180 aa3.32□□□□□ -1.88
PML39YML107C YCR024C-BQ3E7Z8 88 aa3.32□□□□□ -1.88
PML39YML107C PAB1P04147 577 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
PML39YML107C RPL12AP0CX53 165 aaKnown RBP3.31□□□□□ -1.88
PML39YML107C RPL12BP0CX54 165 aa3.31□□□□□ -1.88
PML39YML107C PCL1P24867 279 aa3.31□□□□□ -1.88
PML39YML107C YHK8P38776 514 aa3.31□□□□□ -1.88
PML39YML107C OXA1P39952 402 aa3.31□□□□□ -1.88
PML39YML107C YNL208WP40159 199 aaKnown RBP3.31□□□□□ -1.88
PML39YML107C JEM1P40358 645 aa3.31□□□□□ -1.88
PML39YML107C SEC28P40509 296 aaKnown RBP3.31□□□□□ -1.88
PML39YML107C GAB1P41733 394 aa3.31□□□□□ -1.88
PML39YML107C ERO1Q03103 563 aa3.31□□□□□ -1.88
PML39YML107C URC2Q04411 772 aa3.31□□□□□ -1.88
PML39YML107C ASA1Q06822 443 aa3.31□□□□□ -1.88
PML39YML107C CMS1Q07897 291 aaKnown RBP3.31□□□□□ -1.88
PML39YML107C USO1P25386 1790 aa3.3□□□□□ -1.88
PML39YML107C TY1B-BRQ12193 1756 aa3.3□□□□□ -1.88
PML39YML107C TY1B-GR3Q12316 1755 aa3.3□□□□□ -1.88
PML39YML107C TY1B-ORQ92393 1755 aa3.3□□□□□ -1.88
PML39YML107C SSC1P0CS90 654 aaKnown RBP3.3□□□□□ -1.88
PML39YML107C MCR1P36060 302 aaKnown RBP3.3□□□□□ -1.88
PML39YML107C ECM8P38246 354 aa3.3□□□□□ -1.88
PML39YML107C WSS1P38838 269 aa3.3□□□□□ -1.88
PML39YML107C EGT2P42835 1041 aa3.3□□□□□ -1.88
PML39YML107C ASN2P49090 572 aaKnown RBP3.3□□□□□ -1.88
PML39YML107C YIP5P53108 310 aa3.3□□□□□ -1.88
PML39YML107C CLD1P53264 445 aa3.3□□□□□ -1.88
PML39YML107C CRH1P53301 507 aa3.3□□□□□ -1.88
PML39YML107C RTT102P53330 157 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms