RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C BTN2P53286 410 aa1.82□□□□□ -2.12
SGD1YLR336C YOP1Q12402 180 aa1.82□□□□□ -2.12
SGD1YLR336C RPL6BP05739 176 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C TPK3P05986 398 aa1.82□□□□□ -2.12
SGD1YLR336C ARF1P11076 181 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C RNA1P11745 407 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C MSP1P28737 362 aa1.82□□□□□ -2.12
SGD1YLR336C SKT5P34226 696 aa1.82□□□□□ -2.12
SGD1YLR336C DAD2P36162 133 aa1.82□□□□□ -2.12
SGD1YLR336C EOS1P53938 366 aa1.82□□□□□ -2.12
SGD1YLR336C RPL6AQ02326 176 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C YFH1Q07540 174 aa1.82□□□□□ -2.12
SGD1YLR336C LDS2Q08218 356 aa1.82□□□□□ -2.12
SGD1YLR336C SMF3Q12078 473 aaPredicted RBP1.82□□□□□ -2.12
SGD1YLR336C SFG1Q12507 346 aa1.82□□□□□ -2.12
SGD1YLR336C PAB1P04147 577 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
SGD1YLR336C MCR1P36060 302 aaKnown RBP1.81□□□□□ -2.12
SGD1YLR336C SIF2P38262 535 aa1.81□□□□□ -2.12
SGD1YLR336C YDR286CQ05530 114 aa1.81□□□□□ -2.12
SGD1YLR336C YGK3Q12222 375 aaPredicted RBP1.81□□□□□ -2.12
SGD1YLR336C CEX1Q12453 761 aa1.81□□□□□ -2.12
SGD1YLR336C TFB5Q3E7C1 72 aaPredicted RBP1.81□□□□□ -2.12
SGD1YLR336C YCR024C-BQ3E7Z8 88 aa1.81□□□□□ -2.12
SGD1YLR336C OPI1P21957 404 aa1.81□□□□□ -2.12
SGD1YLR336C UBA1P22515 1024 aaKnown RBP1.81□□□□□ -2.12
SGD1YLR336C DOA1P36037 715 aa1.81□□□□□ -2.12
SGD1YLR336C MRPL10P36520 322 aa1.81□□□□□ -2.12
SGD1YLR336C AIM24P47127 394 aa1.81□□□□□ -2.12
SGD1YLR336C BNS1P50084 137 aa1.81□□□□□ -2.12
SGD1YLR336C YGR016WP53209 190 aa1.81□□□□□ -2.12
SGD1YLR336C RRP46P53256 223 aaPredicted RBP1.81□□□□□ -2.12
SGD1YLR336C MTQ1P53944 314 aa1.81□□□□□ -2.12
SGD1YLR336C UTP6Q02354 440 aaKnown RBP1.81□□□□□ -2.12
SGD1YLR336C AAD15Q08361 143 aa1.81□□□□□ -2.12
SGD1YLR336C TMC1Q08422 150 aaPredicted RBP1.81□□□□□ -2.12
SGD1YLR336C RBD2Q12270 262 aa1.81□□□□□ -2.12
SGD1YLR336C YOR012WQ12351 137 aa1.81□□□□□ -2.12
SGD1YLR336C SRN2Q99176 213 aa1.81□□□□□ -2.12
SGD1YLR336C NAM2P11325 894 aa1.8□□□□□ -2.12
SGD1YLR336C MSI1P13712 422 aa1.8□□□□□ -2.12
SGD1YLR336C YEL045CP32616 141 aa1.8□□□□□ -2.12
SGD1YLR336C PTK1P36002 662 aaPredicted RBP1.8□□□□□ -2.12
SGD1YLR336C YNR068CP53754 272 aa1.8□□□□□ -2.12
SGD1YLR336C YMR102CQ03177 834 aa1.8□□□□□ -2.12
SGD1YLR336C RIF2Q06208 395 aa1.8□□□□□ -2.12
SGD1YLR336C DBP9Q06218 594 aaKnown RBP1.8□□□□□ -2.12
SGD1YLR336C YPR078CQ06813 372 aa1.8□□□□□ -2.12
SGD1YLR336C NDE2Q07500 545 aa1.8□□□□□ -2.12
SGD1YLR336C PML1Q07930 204 aaPredicted RBP1.8□□□□□ -2.12
SGD1YLR336C IZH2Q12442 317 aa1.8□□□□□ -2.12
SGD1YLR336C SUP35P05453 685 aaKnown RBP1.8□□□□□ -2.12
SGD1YLR336C PHO84P25297 587 aaKnown RBP1.8□□□□□ -2.12
SGD1YLR336C PSO2P30620 661 aa1.8□□□□□ -2.12
SGD1YLR336C HXT1P32465 570 aa1.8□□□□□ -2.12
SGD1YLR336C GEP4P38812 185 aa1.8□□□□□ -2.12
SGD1YLR336C PRE5P40302 234 aaKnown RBP1.8□□□□□ -2.12
SGD1YLR336C EGT2P42835 1041 aa1.8□□□□□ -2.12
SGD1YLR336C RTN1Q04947 295 aaKnown RBP1.8□□□□□ -2.12
SGD1YLR336C SMC5Q08204 1093 aa1.8□□□□□ -2.12
SGD1YLR336C PIS1P06197 220 aaKnown RBP1.79□□□□□ -2.12
SGD1YLR336C RVS161P25343 265 aaKnown RBP1.79□□□□□ -2.12
SGD1YLR336C TIR2P33890 251 aa1.79□□□□□ -2.12
SGD1YLR336C PTI1P39927 425 aaPredicted RBP1.79□□□□□ -2.12
SGD1YLR336C ADA2Q02336 434 aa1.79□□□□□ -2.12
SGD1YLR336C MFG1Q07684 458 aa1.79□□□□□ -2.12
SGD1YLR336C GAT3Q07928 141 aa1.79□□□□□ -2.12
SGD1YLR336C IRC25Q07951 179 aa1.79□□□□□ -2.12
SGD1YLR336C EAF3Q12432 401 aa1.79□□□□□ -2.12
SGD1YLR336C REV1P12689 985 aa1.79□□□□□ -2.12
SGD1YLR336C AIM10P39965 576 aaKnown RBP1.79□□□□□ -2.12
SGD1YLR336C NAS2P40555 220 aa1.79□□□□□ -2.12
SGD1YLR336C TIS11P47977 285 aa1.79□□□□□ -2.12
SGD1YLR336C MST27P53176 234 aa1.79□□□□□ -2.12
SGD1YLR336C CRH1P53301 507 aa1.79□□□□□ -2.12
SGD1YLR336C YNL143CP53908 130 aa1.79□□□□□ -2.12
SGD1YLR336C LOT6Q07923 191 aa1.79□□□□□ -2.12
SGD1YLR336C PGC1Q08959 321 aa1.79□□□□□ -2.12
SGD1YLR336C RPS16AP0CX51 143 aaKnown RBP1.78□□□□□ -2.12
SGD1YLR336C RPS16BP0CX52 143 aaKnown RBP1.78□□□□□ -2.12
SGD1YLR336C DBR1P24309 405 aaKnown RBP1.78□□□□□ -2.12
SGD1YLR336C LDB16P25587 256 aa1.78□□□□□ -2.12
SGD1YLR336C ANR2P36090 516 aaPredicted RBP1.78□□□□□ -2.12
SGD1YLR336C SDS24P38314 527 aa1.78□□□□□ -2.12
SGD1YLR336C MHR1Q06630 226 aa1.78□□□□□ -2.12
SGD1YLR336C YPR091CQ06833 770 aa1.78□□□□□ -2.12
SGD1YLR336C PLP2Q12017 286 aa1.78□□□□□ -2.12
SGD1YLR336C FCY22Q12119 530 aa1.78□□□□□ -2.12
SGD1YLR336C PSY3Q12318 242 aa1.78□□□□□ -2.12
SGD1YLR336C WTM1Q12363 437 aaKnown RBP1.78□□□□□ -2.12
SGD1YLR336C YOR338WQ99326 363 aa1.78□□□□□ -2.12
SGD1YLR336C SPT7P35177 1332 aa1.78□□□□□ -2.12
SGD1YLR336C STE3P06783 470 aa1.78□□□□□ -2.12
SGD1YLR336C TPM1P17536 199 aaKnown RBP1.78□□□□□ -2.12
SGD1YLR336C BAT1P38891 393 aaKnown RBP1.78□□□□□ -2.12
SGD1YLR336C CAJ1P39101 391 aa1.78□□□□□ -2.12
SGD1YLR336C MIG3P39943 394 aa1.78□□□□□ -2.12
SGD1YLR336C HAC1P41546 238 aa1.78□□□□□ -2.12
SGD1YLR336C ATG18P43601 500 aa1.78□□□□□ -2.12
SGD1YLR336C CTK3P46963 296 aaPredicted RBP1.78□□□□□ -2.12
SGD1YLR336C BIR1P47134 954 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms