RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W ECM13P38195 257 aa1.85□□□□□ -2.11
VPS34YLR240W KAP104P38217 918 aaKnown RBP1.85□□□□□ -2.11
VPS34YLR240W MUM2P38236 366 aa1.85□□□□□ -2.11
VPS34YLR240W UTP18P40362 594 aaPredicted RBP1.85□□□□□ -2.11
VPS34YLR240W PET130P47065 347 aa1.85□□□□□ -2.11
VPS34YLR240W YDL186WP48568 277 aa1.85□□□□□ -2.11
VPS34YLR240W IMD4P50094 524 aaKnown RBP1.85□□□□□ -2.11
VPS34YLR240W MIG2P53035 382 aa1.85□□□□□ -2.11
VPS34YLR240W IPI3P53877 555 aa1.85□□□□□ -2.11
VPS34YLR240W SPO19Q03029 223 aa1.85□□□□□ -2.11
VPS34YLR240W FMN1Q03778 218 aa1.85□□□□□ -2.11
VPS34YLR240W SFH1Q06168 426 aa1.85□□□□□ -2.11
VPS34YLR240W HRT3Q12347 344 aa1.85□□□□□ -2.11
VPS34YLR240W SUC2P00724 532 aa1.85□□□□□ -2.11
VPS34YLR240W COX4P04037 155 aa1.85□□□□□ -2.11
VPS34YLR240W CHS1P08004 1131 aa1.85□□□□□ -2.11
VPS34YLR240W CBS1P14066 229 aa1.85□□□□□ -2.11
VPS34YLR240W GFD2P25370 566 aaKnown RBP1.85□□□□□ -2.11
VPS34YLR240W ATP7P30902 174 aa1.85□□□□□ -2.11
VPS34YLR240W PTR2P32901 601 aa1.85□□□□□ -2.11
VPS34YLR240W YHL026CP38740 315 aa1.85□□□□□ -2.11
VPS34YLR240W YHB1P39676 399 aaKnown RBP1.85□□□□□ -2.11
VPS34YLR240W TMA22P47089 198 aaPredicted RBP1.85□□□□□ -2.11
VPS34YLR240W IMP4P53941 290 aaKnown RBP1.85□□□□□ -2.11
VPS34YLR240W TOF2Q02208 771 aa1.85□□□□□ -2.11
VPS34YLR240W YMR102CQ03177 834 aa1.85□□□□□ -2.11
VPS34YLR240W CCE1Q03702 353 aa1.85□□□□□ -2.11
VPS34YLR240W CLP1Q08685 445 aaPredicted RBP1.85□□□□□ -2.11
VPS34YLR240W YPL225WQ08971 146 aaKnown RBP1.85□□□□□ -2.11
VPS34YLR240W GPM2Q12008 311 aa1.85□□□□□ -2.11
VPS34YLR240W VPS54Q12071 889 aa1.85□□□□□ -2.11
VPS34YLR240W YDL009CQ12210 107 aa1.85□□□□□ -2.11
VPS34YLR240W RLM1Q12224 676 aa1.85□□□□□ -2.11
VPS34YLR240W CAR1P00812 333 aaKnown RBP1.84□□□□□ -2.11
VPS34YLR240W ELO2P25358 347 aa1.84□□□□□ -2.11
VPS34YLR240W RSA4P25382 515 aaKnown RBP1.84□□□□□ -2.11
VPS34YLR240W PHA2P32452 334 aa1.84□□□□□ -2.11
VPS34YLR240W WBP1P33767 430 aaKnown RBP1.84□□□□□ -2.11
VPS34YLR240W STB6P36085 766 aa1.84□□□□□ -2.11
VPS34YLR240W ETR1P38071 380 aa1.84□□□□□ -2.11
VPS34YLR240W YBR032WP38223 100 aa1.84□□□□□ -2.11
VPS34YLR240W SMF2P38778 549 aa1.84□□□□□ -2.11
VPS34YLR240W RPH1P39956 796 aa1.84□□□□□ -2.11
VPS34YLR240W AIM22P47051 409 aa1.84□□□□□ -2.11
VPS34YLR240W VMA10P48836 114 aaKnown RBP1.84□□□□□ -2.11
VPS34YLR240W SLM2P53955 656 aa1.84□□□□□ -2.11
VPS34YLR240W SPP2Q02521 185 aa1.84□□□□□ -2.11
VPS34YLR240W NHP10Q03435 203 aa1.84□□□□□ -2.11
VPS34YLR240W INP2Q03824 705 aa1.84□□□□□ -2.11
VPS34YLR240W TVP15Q03860 143 aa1.84□□□□□ -2.11
VPS34YLR240W ATG38Q05789 226 aaKnown RBP1.84□□□□□ -2.11
VPS34YLR240W CDC123Q05791 360 aa1.84□□□□□ -2.11
VPS34YLR240W YLR177WQ06251 628 aa1.84□□□□□ -2.11
VPS34YLR240W YLR413WQ06689 675 aa1.84□□□□□ -2.11
VPS34YLR240W SYO1Q07395 620 aa1.84□□□□□ -2.11
VPS34YLR240W THP1Q08231 455 aa1.84□□□□□ -2.11
VPS34YLR240W SET6Q12529 373 aa1.84□□□□□ -2.11
VPS34YLR240W GCN4P03069 281 aa1.84□□□□□ -2.12
VPS34YLR240W CMD1P06787 147 aaKnown RBP1.84□□□□□ -2.12
VPS34YLR240W RAD10P06838 210 aa1.84□□□□□ -2.12
VPS34YLR240W DFR1P07807 211 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
VPS34YLR240W SSC1P0CS90 654 aaKnown RBP1.84□□□□□ -2.12
VPS34YLR240W CBF1P17106 351 aa1.84□□□□□ -2.12
VPS34YLR240W CSM1P25651 190 aa1.84□□□□□ -2.12
VPS34YLR240W MGT1P26188 188 aa1.84□□□□□ -2.12
VPS34YLR240W PHO91P27514 894 aa1.84□□□□□ -2.12
VPS34YLR240W BUD14P27637 709 aa1.84□□□□□ -2.12
VPS34YLR240W PRR1P28708 518 aa1.84□□□□□ -2.12
VPS34YLR240W SIN4P32259 974 aa1.84□□□□□ -2.12
VPS34YLR240W GYP6P32806 458 aa1.84□□□□□ -2.12
VPS34YLR240W GDT1P38301 280 aaPredicted RBP1.84□□□□□ -2.12
VPS34YLR240W KRE9P39005 276 aa1.84□□□□□ -2.12
VPS34YLR240W FHL1P39521 936 aa1.84□□□□□ -2.12
VPS34YLR240W HAT2P39984 401 aa1.84□□□□□ -2.12
VPS34YLR240W SGN1P40561 250 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
VPS34YLR240W RPR2P40571 144 aa1.84□□□□□ -2.12
VPS34YLR240W YJL213WP40896 331 aa1.84□□□□□ -2.12
VPS34YLR240W DLD2P46681 530 aaKnown RBP1.84□□□□□ -2.12
VPS34YLR240W TRF5P48561 642 aaKnown RBP1.84□□□□□ -2.12
VPS34YLR240W NAS6P50086 228 aa1.84□□□□□ -2.12
VPS34YLR240W COS10P52924 374 aa1.84□□□□□ -2.12
VPS34YLR240W MMT1Q03218 510 aa1.84□□□□□ -2.12
VPS34YLR240W LDB18Q07887 179 aa1.84□□□□□ -2.12
VPS34YLR240W YLR012CQ07927 99 aa1.84□□□□□ -2.12
VPS34YLR240W SNX3Q08826 162 aaKnown RBP1.84□□□□□ -2.12
VPS34YLR240W GTT2Q12390 233 aa1.84□□□□□ -2.12
VPS34YLR240W RRD2Q12461 358 aa1.84□□□□□ -2.12
VPS34YLR240W RGS2Q99188 309 aa1.84□□□□□ -2.12
VPS34YLR240W YLR422WQ06409 1932 aa1.83□□□□□ -2.12
VPS34YLR240W HIS1P00498 297 aaKnown RBP1.83□□□□□ -2.12
VPS34YLR240W CBP2P03874 630 aaPredicted RBP1.83□□□□□ -2.12
VPS34YLR240W RSR1P13856 272 aa1.83□□□□□ -2.12
VPS34YLR240W NMT1P14743 455 aa1.83□□□□□ -2.12
VPS34YLR240W HSC82P15108 705 aaKnown RBP1.83□□□□□ -2.12
VPS34YLR240W OCA4P25366 362 aa1.83□□□□□ -2.12
VPS34YLR240W RPL5P26321 297 aaKnown RBP1.83□□□□□ -2.12
VPS34YLR240W RPC19P28000 142 aaKnown RBP1.83□□□□□ -2.12
VPS34YLR240W ATS1P31386 333 aa1.83□□□□□ -2.12
VPS34YLR240W DRE2P36152 348 aa1.83□□□□□ -2.12
VPS34YLR240W MRPL40P36534 297 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms