RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeastyeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRT3YLR097C ADH2P00331 348 aaKnown RBP3.86□□□□□ -1.79
HRT3YLR097C PIS1P06197 220 aaKnown RBP3.86□□□□□ -1.79
HRT3YLR097C SSC1P0CS90 654 aaKnown RBP3.86□□□□□ -1.79
HRT3YLR097C DPH5P32469 300 aaPredicted RBP3.86□□□□□ -1.79
HRT3YLR097C MCR1P36060 302 aaKnown RBP3.86□□□□□ -1.79
HRT3YLR097C SWD3P38123 315 aa3.86□□□□□ -1.79
HRT3YLR097C SPP381P38282 291 aaPredicted RBP3.86□□□□□ -1.79
HRT3YLR097C AIM24P47127 394 aa3.86□□□□□ -1.79
HRT3YLR097C PRM6Q04705 352 aa3.86□□□□□ -1.79
HRT3YLR097C ASA1Q06822 443 aa3.86□□□□□ -1.79
HRT3YLR097C LDS2Q08218 356 aa3.86□□□□□ -1.79
HRT3YLR097C YGK3Q12222 375 aaPredicted RBP3.86□□□□□ -1.79
HRT3YLR097C HRT3Q12347 344 aa3.86□□□□□ -1.79
HRT3YLR097C ISY1P21374 235 aaPredicted RBP3.85□□□□□ -1.79
HRT3YLR097C PHO84P25297 587 aaKnown RBP3.85□□□□□ -1.79
HRT3YLR097C RVS161P25343 265 aaKnown RBP3.85□□□□□ -1.79
HRT3YLR097C YEL045CP32616 141 aa3.85□□□□□ -1.79
HRT3YLR097C CSE2P33308 149 aa3.85□□□□□ -1.79
HRT3YLR097C SPT10P35208 640 aa3.85□□□□□ -1.79
HRT3YLR097C LAS1P36146 502 aaPredicted RBP3.85□□□□□ -1.79
HRT3YLR097C HAC1P41546 238 aa3.85□□□□□ -1.79
HRT3YLR097C LCB3P47013 409 aa3.85□□□□□ -1.79
HRT3YLR097C YJR085CP47131 105 aaKnown RBP3.85□□□□□ -1.79
HRT3YLR097C TOS2P50078 622 aa3.85□□□□□ -1.79
HRT3YLR097C TRM112P53738 135 aaPredicted RBP3.85□□□□□ -1.79
HRT3YLR097C COS1P53822 381 aa3.85□□□□□ -1.79
HRT3YLR097C GIS2P53849 153 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79 RIP-Chip
HRT3YLR097C ADA2Q02336 434 aa3.85□□□□□ -1.79
HRT3YLR097C NOP6Q07623 225 aaKnown RBP3.85□□□□□ -1.79
HRT3YLR097C NFI1Q12216 726 aa3.85□□□□□ -1.79
HRT3YLR097C SPT7P35177 1332 aa3.85□□□□□ -1.79
HRT3YLR097C RNA1P11745 407 aaKnown RBP3.84□□□□□ -1.79
HRT3YLR097C MSI1P13712 422 aa3.84□□□□□ -1.79
HRT3YLR097C DAP2P18962 818 aa3.84□□□□□ -1.79
HRT3YLR097C RAD5P32849 1169 aaPredicted RBP3.84□□□□□ -1.79
HRT3YLR097C YOX1P34161 385 aa3.84□□□□□ -1.79
HRT3YLR097C RTN1Q04947 295 aaKnown RBP3.84□□□□□ -1.79
HRT3YLR097C RIF2Q06208 395 aa3.84□□□□□ -1.79
HRT3YLR097C SMF3Q12078 473 aaPredicted RBP3.84□□□□□ -1.79
HRT3YLR097C JID1Q12350 301 aa3.84□□□□□ -1.79
HRT3YLR097C AHC1Q12433 566 aa3.84□□□□□ -1.79
HRT3YLR097C HTZ1Q12692 134 aaKnown RBP3.84□□□□□ -1.79
HRT3YLR097C REV1P12689 985 aa3.83□□□□□ -1.8
HRT3YLR097C RPB5P20434 215 aa3.83□□□□□ -1.8
HRT3YLR097C OPI1P21957 404 aa3.83□□□□□ -1.8
HRT3YLR097C UBA1P22515 1024 aaKnown RBP3.83□□□□□ -1.8
HRT3YLR097C FAA1P30624 700 aaKnown RBP3.83□□□□□ -1.8
HRT3YLR097C TOA2P32774 122 aa3.83□□□□□ -1.8
HRT3YLR097C MRPL10P36520 322 aa3.83□□□□□ -1.8
HRT3YLR097C GPX2P38143 162 aa3.83□□□□□ -1.8
HRT3YLR097C GEP4P38812 185 aa3.83□□□□□ -1.8
HRT3YLR097C YHR177WP38867 453 aa3.83□□□□□ -1.8
HRT3YLR097C YFR057WP43625 151 aa3.83□□□□□ -1.8
HRT3YLR097C SDT1P53078 280 aa3.83□□□□□ -1.8
HRT3YLR097C RRN9P53437 365 aa3.83□□□□□ -1.8
HRT3YLR097C TDA1Q03533 586 aa3.83□□□□□ -1.8
HRT3YLR097C IZH2Q12442 317 aa3.83□□□□□ -1.8
HRT3YLR097C YCR024C-BQ3E7Z8 88 aa3.83□□□□□ -1.8
HRT3YLR097C TIR2P33890 251 aa3.82□□□□□ -1.8
HRT3YLR097C ADH5P38113 351 aaKnown RBP3.82□□□□□ -1.8
HRT3YLR097C YHK8P38776 514 aa3.82□□□□□ -1.8
HRT3YLR097C MST27P53176 234 aa3.82□□□□□ -1.8
HRT3YLR097C PEX27Q08580 376 aa3.82□□□□□ -1.8
HRT3YLR097C PLP2Q12017 286 aa3.82□□□□□ -1.8
HRT3YLR097C WTM1Q12363 437 aaKnown RBP3.82□□□□□ -1.8
HRT3YLR097C SCH9P11792 824 aaKnown RBP3.81□□□□□ -1.8
HRT3YLR097C YHR131CP38835 850 aa3.81□□□□□ -1.8
HRT3YLR097C YMR027WQ04371 470 aa3.81□□□□□ -1.8
HRT3YLR097C CMS1Q07897 291 aaKnown RBP3.81□□□□□ -1.8
HRT3YLR097C RBD2Q12270 262 aa3.81□□□□□ -1.8
HRT3YLR097C MRPL8P22353 238 aa3.8□□□□□ -1.8
HRT3YLR097C POT1P27796 417 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
HRT3YLR097C PRR1P28708 518 aa3.8□□□□□ -1.8
HRT3YLR097C PSO2P30620 661 aa3.8□□□□□ -1.8
HRT3YLR097C CAJ1P39101 391 aa3.8□□□□□ -1.8
HRT3YLR097C AIM10P39965 576 aaKnown RBP3.8□□□□□ -1.8
HRT3YLR097C PRE5P40302 234 aaKnown RBP3.8□□□□□ -1.8
HRT3YLR097C RPA34P47006 233 aaPredicted RBP3.8□□□□□ -1.8
HRT3YLR097C BIR1P47134 954 aa3.8□□□□□ -1.8
HRT3YLR097C MPS2P53159 387 aa3.8□□□□□ -1.8
HRT3YLR097C CLD1P53264 445 aa3.8□□□□□ -1.8
HRT3YLR097C YNR068CP53754 272 aa3.8□□□□□ -1.8
HRT3YLR097C DBP9Q06218 594 aaKnown RBP3.8□□□□□ -1.8
HRT3YLR097C MEX67Q99257 599 aaKnown RBP3.8□□□□□ -1.8
HRT3YLR097C LDB16P25587 256 aa3.79□□□□□ -1.8
HRT3YLR097C ECM8P38246 354 aa3.79□□□□□ -1.8
HRT3YLR097C SDS24P38314 527 aa3.79□□□□□ -1.8
HRT3YLR097C SNL1P40548 159 aa3.79□□□□□ -1.8
HRT3YLR097C SHE10P53075 577 aa3.79□□□□□ -1.8
HRT3YLR097C YGR016WP53209 190 aa3.79□□□□□ -1.8
HRT3YLR097C RET3P53600 189 aa3.79□□□□□ -1.8
HRT3YLR097C YPR091CQ06833 770 aa3.79□□□□□ -1.8
HRT3YLR097C YDL114WQ07530 308 aa3.79□□□□□ -1.8
HRT3YLR097C PCL9Q12477 304 aa3.79□□□□□ -1.8
HRT3YLR097C NBL1Q3E7Y6 73 aa3.79□□□□□ -1.8
HRT3YLR097C RDS1P25611 832 aa3.78□□□□□ -1.8
HRT3YLR097C MSK1P32048 576 aa3.78□□□□□ -1.8
HRT3YLR097C EFB1P32471 206 aaKnown RBP3.78□□□□□ -1.8
HRT3YLR097C SIF2P38262 535 aa3.78□□□□□ -1.8
HRT3YLR097C RTC2P38279 296 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms