RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C GLR1P41921 483 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C PFD1P46988 109 aa2.25□□□□□ -2.05
VPS13YLL040C PEX21P50091 288 aa2.25□□□□□ -2.05
VPS13YLL040C RAI1P53063 387 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C HST3P53687 447 aa2.25□□□□□ -2.05
VPS13YLL040C NAM8Q00539 523 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C PIR3Q03180 325 aa2.25□□□□□ -2.05
VPS13YLL040C SIZ1Q04195 904 aa2.25□□□□□ -2.05
VPS13YLL040C YLR040CQ07988 224 aa2.25□□□□□ -2.05
VPS13YLL040C RRP40Q08285 240 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C FRE3Q08905 711 aa2.25□□□□□ -2.05
VPS13YLL040C YPL272CQ08984 517 aa2.25□□□□□ -2.05
VPS13YLL040C PIN2Q12057 282 aa2.25□□□□□ -2.05
VPS13YLL040C YLR118CQ12354 227 aa2.25□□□□□ -2.05
VPS13YLL040C YKL033W-AQ86ZR7 236 aa2.25□□□□□ -2.05
VPS13YLL040C FSH3Q99369 266 aa2.25□□□□□ -2.05
VPS13YLL040C YBP1P38315 674 aa2.25□□□□□ -2.05
VPS13YLL040C RGI1P40043 161 aaPredicted RBP2.25□□□□□ -2.05
VPS13YLL040C YGL039WP53183 348 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C YGR015CP53208 328 aa2.25□□□□□ -2.05
VPS13YLL040C LSM7P53905 115 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C GPN3Q06543 272 aa2.25□□□□□ -2.05
VPS13YLL040C STB3Q12427 513 aa2.25□□□□□ -2.05
VPS13YLL040C LSO2Q3E772 92 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C YGL041W-AP0C5N3 154 aa2.25□□□□□ -2.05
VPS13YLL040C CDC5P32562 705 aa2.25□□□□□ -2.05
VPS13YLL040C PUB1P32588 453 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
VPS13YLL040C MNN2P38069 597 aa2.25□□□□□ -2.05
VPS13YLL040C THI2P38141 450 aa2.25□□□□□ -2.05
VPS13YLL040C RRP4P38792 359 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C HSP10P38910 106 aa2.25□□□□□ -2.05
VPS13YLL040C SER2P42941 309 aa2.25□□□□□ -2.05
VPS13YLL040C AIM23P47015 356 aa2.25□□□□□ -2.05
VPS13YLL040C SRB7P47822 140 aa2.25□□□□□ -2.05
VPS13YLL040C TYW3P53177 273 aa2.25□□□□□ -2.05
VPS13YLL040C GOT1Q03554 138 aa2.25□□□□□ -2.05
VPS13YLL040C ARA2Q04212 335 aa2.25□□□□□ -2.05
VPS13YLL040C RNH202Q05635 350 aa2.25□□□□□ -2.05
VPS13YLL040C CRR1Q05790 422 aa2.25□□□□□ -2.05
VPS13YLL040C MET16P18408 261 aaPredicted RBP2.25□□□□□ -2.05
VPS13YLL040C CAD1P24813 409 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C IFM1P25038 676 aa2.25□□□□□ -2.05
VPS13YLL040C SED4P25365 1065 aa2.25□□□□□ -2.05
VPS13YLL040C HXT3P32466 567 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C RSM22P36056 628 aa2.25□□□□□ -2.05
VPS13YLL040C OPT1P40897 799 aa2.25□□□□□ -2.05
VPS13YLL040C YFL012WP43580 148 aa2.25□□□□□ -2.05
VPS13YLL040C EAF6P47128 113 aa2.25□□□□□ -2.05
VPS13YLL040C CCC1P47818 322 aa2.25□□□□□ -2.05
VPS13YLL040C TRM44Q02648 567 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C BSP1Q06604 576 aa2.25□□□□□ -2.05
VPS13YLL040C FEX2Q08991 375 aa2.25□□□□□ -2.05
VPS13YLL040C PFA4Q12006 378 aa2.25□□□□□ -2.05
VPS13YLL040C YDL176WQ12027 708 aa2.25□□□□□ -2.05
VPS13YLL040C PER33Q12144 273 aa2.25□□□□□ -2.05
VPS13YLL040C HOP09932 586 aa2.25□□□□□ -2.05
VPS13YLL040C AVT2P39981 480 aa2.25□□□□□ -2.05
VPS13YLL040C LSM5P40089 93 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C XBP1P40489 647 aa2.25□□□□□ -2.05
VPS13YLL040C UBC9P50623 157 aaPredicted RBP2.25□□□□□ -2.05
VPS13YLL040C RVB1Q03940 463 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C YPR114WQ06107 315 aa2.25□□□□□ -2.05
VPS13YLL040C VTA1Q06263 330 aa2.25□□□□□ -2.05
VPS13YLL040C VPS68Q12016 184 aa2.25□□□□□ -2.05
VPS13YLL040C SPS2P08459 502 aa2.25□□□□□ -2.05
VPS13YLL040C TEC1P18412 486 aa2.25□□□□□ -2.05
VPS13YLL040C TRS65P32893 560 aa2.25□□□□□ -2.05
VPS13YLL040C GLG1P36143 616 aa2.25□□□□□ -2.05
VPS13YLL040C BIG1P38813 335 aa2.25□□□□□ -2.05
VPS13YLL040C VMA7P39111 118 aa2.25□□□□□ -2.05
VPS13YLL040C CSN12P47130 423 aa2.25□□□□□ -2.05
VPS13YLL040C FEX1Q08913 375 aa2.25□□□□□ -2.05
VPS13YLL040C MATALPHA1P0CY06 175 aa2.25□□□□□ -2.05
VPS13YLL040C HMLALPHA1P0CY07 175 aa2.25□□□□□ -2.05
VPS13YLL040C SCH9P11792 824 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C APN1P22936 367 aa2.25□□□□□ -2.05
VPS13YLL040C OXP1P28273 1286 aa2.25□□□□□ -2.05
VPS13YLL040C PET309P32522 965 aaPredicted RBP2.25□□□□□ -2.05
VPS13YLL040C CAT2P32796 670 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C RPF2P36160 344 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C GIC1P38785 314 aa2.25□□□□□ -2.05
VPS13YLL040C MDM31P38880 579 aa2.25□□□□□ -2.05
VPS13YLL040C MBP1P39678 833 aa2.25□□□□□ -2.05
VPS13YLL040C SKP2P42843 763 aa2.25□□□□□ -2.05
VPS13YLL040C RPS7BP48164 190 aaKnown RBP2.25□□□□□ -2.05
VPS13YLL040C PRM8P53174 237 aa2.25□□□□□ -2.05
VPS13YLL040C SPC98P53540 846 aa2.25□□□□□ -2.05
VPS13YLL040C LEA1Q08963 238 aaPredicted RBP2.25□□□□□ -2.05
VPS13YLL040C MRH1Q12117 320 aaPredicted RBP2.25□□□□□ -2.05
VPS13YLL040C UBR2Q07963 1872 aa2.25□□□□□ -2.05
VPS13YLL040C YBR085C-AO43137 85 aa2.24□□□□□ -2.05
VPS13YLL040C FUM1P08417 488 aaKnown RBP2.24□□□□□ -2.05
VPS13YLL040C ATG22P25568 528 aa2.24□□□□□ -2.05
VPS13YLL040C SYP1P25623 870 aaKnown RBP2.24□□□□□ -2.05
VPS13YLL040C GCD11P32481 527 aaKnown RBP2.24□□□□□ -2.05
VPS13YLL040C PEX32P38292 413 aa2.24□□□□□ -2.05
VPS13YLL040C BTT1P40314 149 aaPredicted RBP2.24□□□□□ -2.05
VPS13YLL040C DAN4P47179 1161 aa2.24□□□□□ -2.05
VPS13YLL040C JIP4Q03361 876 aa2.24□□□□□ -2.05
VPS13YLL040C RIM13Q03792 727 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms