RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	YPL272C	Q08984	517 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	MDM12	Q92328	271 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	PNO1	Q99216	274 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	AFI1	Q99222	893 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
RRN3	YKL125W	RFA1	P22336	621 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	SRB6	P32570	121 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	TCA17	P32613	152 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	LIP5	P32875	414 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	ASH1	P34233	588 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	SSS1	P35179	80 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	CTF13	P35203	478 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	FLO10	P36170	1169 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	YJL206C	P39529	758 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	AVT2	P39981	480 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	TOS3	P43637	560 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	TPO1	Q07824	586 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	PPM2	Q08282	695 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	TRE2	Q08693	809 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	APC9	Q12107	265 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	LCB4	Q12246	624 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	LPX1	Q12405	387 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	YPL119C-A	Q3E751	87 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	YOR019W	Q99248	730 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	RAD52	P06778	471 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	BCY1	P07278	416 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	SPE1	P08432	466 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	TCP1	P12612	559 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	RPL8A	P17076	256 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	PHO80	P20052	293 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	PRP2	P20095	876 aa	Predicted RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	GID7	P25569	745 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	IMG1	P25626	169 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	BUB3	P26449	341 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	URA7	P28274	579 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	RPL8B	P29453	256 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	ATP7	P30902	174 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	SNU114	P36048	1008 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	YKL162C	P36052	402 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	PET10	P36139	283 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	YKR051W	P36142	418 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	FSH1	P38777	243 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	SPL2	P38839	148 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	IKI1	P38874	309 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	MNL1	P38888	796 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	RBG1	P39729	369 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	NPR2	P39923	615 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	YGR201C	P42936	225 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	ASG7	P46993	209 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	MRX5	P47007	382 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	NCS6	P53088	359 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	YNL033W	P53964	284 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	YNL019C	P53975	284 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	HXT11	P54862	567 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	MAK3	Q03503	176 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	NHX1	Q04121	633 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	GAS2	Q06135	555 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	HDA2	Q06629	674 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	RRP40	Q08285	240 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	YOR365C	Q08844	703 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	NSL1	Q12143	216 aa		5.06	□□□□□ -1.6
RRN3	YKL125W	PKH2	Q12236	1081 aa	Known RBP	5.06	□□□□□ -1.6
RRN3	YKL125W	YER152C	P10356	443 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	RNR1	P21524	888 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	PDC2	P32896	925 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	YBR241C	P38142	488 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	EXO5	P38289	585 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	PGD1	P40356	397 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	YFL040W	P43562	540 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	TAX4	P47030	604 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	MOG1	P47123	218 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	ADO1	P47143	340 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	YGR042W	P53227	271 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	IDP3	P53982	420 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	TRS31	Q03337	283 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	YLR108C	Q12259	485 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	RBD2	Q12270	262 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	Q0144	Q9ZZW2	109 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	ADH2	P00331	348 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	CAR1	P00812	333 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	AI3	P03877	415 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	GAL80	P04387	435 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	MSS18	P08593	268 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	PRB1	P09232	635 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	CKS1	P20486	150 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	PRE1	P22141	198 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	PRE7	P23724	241 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	EMC1	P25574	760 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	AHC2	P25649	128 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	DBF4	P32325	704 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	HMX1	P32339	317 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	SRO77	P38163	1010 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	AIM3	P38266	947 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	PEP8	P40335	379 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	AIR1	P40507	360 aa	Known RBP	5.05	□□□□□ -1.6
RRN3	YKL125W	MND2	P40577	368 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	SKP2	P42843	763 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	YML6	P51998	286 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	SCW11	P53189	542 aa		5.05	□□□□□ -1.6
RRN3	YKL125W	RHO3	Q00245	231 aa	Known RBP	5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 100.2 ms