RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	COX3	P00420	269 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	CDC33	P07260	213 aa	Known RBP	4.08	□□□□□ -1.76
CDC6	YJL194W	TCP1	P12612	559 aa	Known RBP	4.08	□□□□□ -1.76
CDC6	YJL194W	ABF1	P14164	731 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	FBA1	P14540	359 aa	Known RBP	4.08	□□□□□ -1.76
CDC6	YJL194W	MET16	P18408	261 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC6	YJL194W	DAL82	P21705	255 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	PUT3	P25502	979 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC6	YJL194W	RGT1	P32862	1170 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	TRM2	P33753	639 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	COS9	P36034	407 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	GMH1	P36125	273 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	BIG1	P38813	335 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	DSE1	P40077	573 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	LAS21	P40367	830 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	YAR1	P46683	200 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	IBA57	P47158	497 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	YPT11	P48559	417 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	YGR168C	P53293	376 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	DIP5	P53388	608 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	SAM50	P53969	484 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	NCB2	Q92317	146 aa		4.08	□□□□□ -1.76
CDC6	YJL194W	TEF1	P02994	458 aa	Known RBP	4.07	□□□□□ -1.76
CDC6	YJL194W	SNF6	P18888	332 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	SLM5	P25345	492 aa	Known RBP	4.07	□□□□□ -1.76
CDC6	YJL194W	RRT12	P25381	491 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	ERG9	P29704	444 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	VMA6	P32366	345 aa	Known RBP	4.07	□□□□□ -1.76
CDC6	YJL194W	CBT1	P36038	271 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC6	YJL194W	CBP4	P37267	147 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	CTP1	P38152	299 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	HIS2	P38635	335 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	RRP4	P38792	359 aa	Known RBP	4.07	□□□□□ -1.76
CDC6	YJL194W	RTC3	P38804	111 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC6	YJL194W	YHR177W	P38867	453 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	YER079W	P40052	210 aa	Known RBP	4.07	□□□□□ -1.76
CDC6	YJL194W	VPS60	Q03390	229 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	IZH1	Q03419	316 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	YDR222W	Q04925	415 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	YML053C	Q04978	212 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	THP1	Q08231	455 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	TIP41	Q12199	356 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	SIA1	Q12212	622 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	YLR108C	Q12259	485 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	NPC2	Q12408	173 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	FSH3	Q99369	266 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	DNF2	Q12675	1612 aa		4.07	□□□□□ -1.76
CDC6	YJL194W	THP2	O13539	261 aa	Known RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	MET3	P08536	511 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	MAS2	P11914	482 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	ATP10	P18496	279 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	FUB1	P25659	250 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	MSS1	P32559	526 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	GCG1	P32656	232 aa	Known RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	SHP1	P34223	423 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	LST4	P34239	828 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	SOR1	P35497	357 aa	Known RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	PRS4	P38063	326 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	RIB1	P38066	345 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	YDL186W	P48568	277 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	MNN10	P50108	393 aa	Known RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	COG2	P53271	262 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	MRPS35	P53292	345 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	BUD17	P53727	317 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	RSM23	Q01163	450 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	YVH1	Q02256	364 aa	Known RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	THI7	Q05998	598 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	ATG26	Q06321	1198 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	SOR2	Q07786	357 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	ABP140	Q08641	628 aa	Known RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	GPM2	Q12008	311 aa		4.06	□□□□□ -1.76
CDC6	YJL194W	RIO1	Q12196	484 aa	Known RBP	4.06	□□□□□ -1.76
CDC6	YJL194W	RAD1	P06777	1100 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	DST1	P07273	309 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	AMD2	P22580	549 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	DBR1	P24309	405 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	VMA5	P31412	392 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	ACH1	P32316	526 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	UBC6	P33296	250 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	MIC12	P38341	106 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	UBA4	P38820	440 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	PHM8	P40025	321 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	POP1	P41812	875 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	COX16	P47081	118 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	TMA22	P47089	198 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	YGL159W	P53110	370 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	SLG1	P54867	378 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	KRE28	Q04431	385 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	MDM30	Q05930	598 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	ARO10	Q06408	635 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	ATG17	Q06410	417 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	ENB1	Q08299	606 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	YOR389W	Q08912	624 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	SAM4	Q08985	325 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	YDL109C	Q12103	647 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	BUD3	P25558	1636 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	ADH2	P00331	348 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	YPT1	P01123	206 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	CLN3	P13365	580 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms