RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	AIM33	Q04516	312 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	PFA4	Q12006	378 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	YRM1	Q12340	786 aa		4.04	□□□□□ -1.76
VMA22	YHR060W	MER1	P16523	270 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	CKI1	P20485	582 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	PRO3	P32263	286 aa	Known RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	HXT1	P32465	570 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VMA22	YHR060W	BMH2	P34730	273 aa	Known RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	HOT13	P36078	116 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	YPK3	P38070	525 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	OSH3	P38713	996 aa	Known RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	AIM10	P39965	576 aa	Known RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	INA22	P40576	216 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	COX16	P47081	118 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	PMT5	P52867	743 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	YGR168C	P53293	376 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	IRC15	Q02733	499 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	LGE1	Q02796	332 aa	Known RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	SRL4	Q03085	281 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	MSS11	Q03825	758 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	SMP3	Q04174	516 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	MRPL51	Q06090	140 aa	Predicted RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	SNT309	Q06091	175 aa	Predicted RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	ASA1	Q06822	443 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	SIA1	Q12212	622 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	PKH2	Q12236	1081 aa	Known RBP	4.03	□□□□□ -1.76
VMA22	YHR060W	ORT1	Q12375	292 aa		4.03	□□□□□ -1.76
VMA22	YHR060W	YPT1	P01123	206 aa	Known RBP	4.02	□□□□□ -1.77
VMA22	YHR060W	RAD7	P06779	565 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	CDC42	P19073	191 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	SPS22	P25380	463 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	RPS2	P25443	254 aa	Known RBP	4.02	□□□□□ -1.77
VMA22	YHR060W	CSM1	P25651	190 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	ACB1	P31787	87 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	MSN4	P33749	630 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	ECM15	P35195	104 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	PEX32	P38292	413 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	FHL1	P39521	936 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	SCC4	P40090	624 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	YJL070C	P40361	888 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	RTS2	P40962	232 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	SNO3	P43544	222 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	BNA6	P43619	295 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	YNR048W	P53740	393 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	FRE4	P53746	719 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	YNL134C	P53912	376 aa	Known RBP	4.02	□□□□□ -1.77
VMA22	YHR060W	UBX2	Q04228	584 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	BNA5	Q05979	453 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	THI20	Q08224	551 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	SRL2	Q12020	392 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	RKM5	Q12367	367 aa		4.02	□□□□□ -1.77
VMA22	YHR060W	SSK22	P25390	1331 aa	Predicted RBP	4.01	□□□□□ -1.77
VMA22	YHR060W	HEM2	P05373	342 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	GDH1	P07262	454 aa	Known RBP	4.01	□□□□□ -1.77
VMA22	YHR060W	ARF2	P19146	181 aa	Known RBP	4.01	□□□□□ -1.77
VMA22	YHR060W	YCR100C	P25606	316 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	PPZ1	P26570	692 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	SRB4	P32569	687 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	VAM7	P32912	316 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	FRE2	P36033	711 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	YKL071W	P36086	256 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	MMS21	P38632	267 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	YHR045W	P38775	560 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	FET3	P38993	636 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	ALD5	P40047	520 aa	Known RBP	4.01	□□□□□ -1.77
VMA22	YHR060W	YER085C	P40058	173 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	KAP114	P53067	1004 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	YGR117C	P53270	476 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	MNT4	P53745	580 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	PGA2	P53903	129 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	IDP3	P53982	420 aa	Known RBP	4.01	□□□□□ -1.77
VMA22	YHR060W	SPR6	Q01684	191 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	ODC1	Q03028	310 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	SAM4	Q08985	325 aa	Known RBP	4.01	□□□□□ -1.77
VMA22	YHR060W	YDL009C	Q12210	107 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	TPT1	Q12272	230 aa	Known RBP	4.01	□□□□□ -1.77
VMA22	YHR060W	YOP1	Q12402	180 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	AHC1	Q12433	566 aa		4.01	□□□□□ -1.77
VMA22	YHR060W	TEF1	P02994	458 aa	Known RBP	4	□□□□□ -1.77
VMA22	YHR060W	MRPL25	P23369	157 aa		4	□□□□□ -1.77
VMA22	YHR060W	GPI12	P23797	304 aa		4	□□□□□ -1.77
VMA22	YHR060W	RBK1	P25332	333 aa		4	□□□□□ -1.77
VMA22	YHR060W	DAL2	P25335	343 aa		4	□□□□□ -1.77
VMA22	YHR060W	MXR2	P25566	168 aa		4	□□□□□ -1.77
VMA22	YHR060W	YCR016W	P25617	290 aa	Known RBP	4	□□□□□ -1.77
VMA22	YHR060W	PRR1	P28708	518 aa		4	□□□□□ -1.77
VMA22	YHR060W	DEG1	P31115	442 aa	Known RBP	4	□□□□□ -1.77
VMA22	YHR060W	CYM1	P32898	989 aa		4	□□□□□ -1.77
VMA22	YHR060W	PDR3	P33200	976 aa		4	□□□□□ -1.77
VMA22	YHR060W	MYO3	P36006	1272 aa		4	□□□□□ -1.77
VMA22	YHR060W	YKR015C	P36111	568 aa		4	□□□□□ -1.77
VMA22	YHR060W	SPC34	P36131	295 aa		4	□□□□□ -1.77
VMA22	YHR060W	SCO2	P38072	301 aa		4	□□□□□ -1.77
VMA22	YHR060W	LEU5	P38702	357 aa		4	□□□□□ -1.77
VMA22	YHR060W	YHR182W	P38870	785 aa		4	□□□□□ -1.77
VMA22	YHR060W	RBG1	P39729	369 aa		4	□□□□□ -1.77
VMA22	YHR060W	RTR1	P40084	226 aa	Predicted RBP	4	□□□□□ -1.77
VMA22	YHR060W	YPT11	P48559	417 aa		4	□□□□□ -1.77
VMA22	YHR060W	PHB2	P50085	310 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms