RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YJR154WP47181 346 aa3.37□□□□□ -1.87
CAF130YGR134W STB4P50104 949 aa3.37□□□□□ -1.87
CAF130YGR134W ZPR1P53303 486 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W UBP16Q02863 499 aa3.37□□□□□ -1.87
CAF130YGR134W YDR132CQ03900 495 aa3.37□□□□□ -1.87
CAF130YGR134W PIG1Q06216 648 aa3.37□□□□□ -1.87
CAF130YGR134W MSH5Q12175 901 aa3.37□□□□□ -1.87
CAF130YGR134W NPC2Q12408 173 aa3.37□□□□□ -1.87
CAF130YGR134W BRR1Q99177 341 aaPredicted RBP3.37□□□□□ -1.87
CAF130YGR134W CDC33P07260 213 aaKnown RBP3.37□□□□□ -1.87
CAF130YGR134W VAM7P32912 316 aa3.37□□□□□ -1.87
CAF130YGR134W YKL097CP34245 136 aa3.37□□□□□ -1.87
CAF130YGR134W BIG1P38813 335 aa3.37□□□□□ -1.87
CAF130YGR134W PFS1P38872 237 aa3.37□□□□□ -1.87
CAF130YGR134W YJR011CP47086 261 aaPredicted RBP3.37□□□□□ -1.87
CAF130YGR134W PKP2P53170 491 aa3.37□□□□□ -1.87
CAF130YGR134W BUD17P53727 317 aa3.37□□□□□ -1.87
CAF130YGR134W SSY1Q03770 852 aa3.37□□□□□ -1.87
CAF130YGR134W RUP1Q12242 671 aa3.37□□□□□ -1.87
CAF130YGR134W BNI1P41832 1953 aa3.36□□□□□ -1.87
CAF130YGR134W RAD3P06839 778 aa3.36□□□□□ -1.87
CAF130YGR134W SPS4P09937 338 aa3.36□□□□□ -1.87
CAF130YGR134W RPS24AP0CX31 135 aaKnown RBP3.36□□□□□ -1.87
CAF130YGR134W RPS24BP0CX32 135 aaKnown RBP3.36□□□□□ -1.87
CAF130YGR134W UTR1P21373 530 aa3.36□□□□□ -1.87
CAF130YGR134W GSY2P27472 705 aa3.36□□□□□ -1.87
CAF130YGR134W RAD14P28519 371 aa3.36□□□□□ -1.87
CAF130YGR134W SPT10P35208 640 aa3.36□□□□□ -1.87
CAF130YGR134W YER121WP40076 114 aa3.36□□□□□ -1.87
CAF130YGR134W HOC1P47124 396 aa3.36□□□□□ -1.87
CAF130YGR134W YPR003CP53394 754 aa3.36□□□□□ -1.87
CAF130YGR134W YDC1Q02896 317 aa3.36□□□□□ -1.87
CAF130YGR134W CMS1Q07897 291 aaKnown RBP3.36□□□□□ -1.87
CAF130YGR134W TEN1Q07921 160 aa3.36□□□□□ -1.87
CAF130YGR134W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
CAF130YGR134W NCB2Q92317 146 aa3.36□□□□□ -1.87
CAF130YGR134W GLT1Q12680 2145 aaKnown RBP3.36□□□□□ -1.87
CAF130YGR134W GPI12P23797 304 aa3.36□□□□□ -1.87
CAF130YGR134W GDA1P32621 518 aa3.36□□□□□ -1.87
CAF130YGR134W MSN2P33748 704 aa3.36□□□□□ -1.87
CAF130YGR134W ELF1P36053 145 aa3.36□□□□□ -1.87
CAF130YGR134W LEU5P38702 357 aa3.36□□□□□ -1.87
CAF130YGR134W HXT9P40885 567 aa3.36□□□□□ -1.87
CAF130YGR134W YFR057WP43625 151 aa3.36□□□□□ -1.87
CAF130YGR134W UBX6P47049 396 aa3.36□□□□□ -1.87
CAF130YGR134W CGR1P53188 120 aa3.36□□□□□ -1.87
CAF130YGR134W MKC7P53379 596 aa3.36□□□□□ -1.87
CAF130YGR134W HXT11P54862 567 aa3.36□□□□□ -1.87
CAF130YGR134W BRX1Q08235 291 aaKnown RBP3.36□□□□□ -1.87
CAF130YGR134W DNL4Q08387 944 aaPredicted RBP3.36□□□□□ -1.87
CAF130YGR134W SUT2Q12286 268 aa3.36□□□□□ -1.87
CAF130YGR134W GLE1Q12315 538 aa3.36□□□□□ -1.87
CAF130YGR134W RAD1P06777 1100 aa3.35□□□□□ -1.87
CAF130YGR134W MAS1P10507 462 aa3.35□□□□□ -1.87
CAF130YGR134W REV1P12689 985 aa3.35□□□□□ -1.87
CAF130YGR134W PPZ1P26570 692 aa3.35□□□□□ -1.87
CAF130YGR134W PTC7P38797 343 aa3.35□□□□□ -1.87
CAF130YGR134W PRP39P39682 629 aaKnown RBP3.35□□□□□ -1.87
CAF130YGR134W YCH1P42937 148 aa3.35□□□□□ -1.87
CAF130YGR134W YHC3P47040 408 aa3.35□□□□□ -1.87
CAF130YGR134W ERG26P53199 349 aaKnown RBP3.35□□□□□ -1.87
CAF130YGR134W IST1P53843 298 aaPredicted RBP3.35□□□□□ -1.87
CAF130YGR134W SPP2Q02521 185 aa3.35□□□□□ -1.87
CAF130YGR134W UBX2Q04228 584 aa3.35□□□□□ -1.87
CAF130YGR134W BUR2Q05949 395 aa3.35□□□□□ -1.87
CAF130YGR134W MRH1Q12117 320 aaPredicted RBP3.35□□□□□ -1.87
CAF130YGR134W ATP6P00854 259 aa3.35□□□□□ -1.87
CAF130YGR134W SAR1P20606 190 aaKnown RBP3.35□□□□□ -1.87
CAF130YGR134W NRP1P32770 719 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
CAF130YGR134W PAD1P33751 242 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87 RIP-Chip
CAF130YGR134W ARA1P38115 344 aa3.35□□□□□ -1.87
CAF130YGR134W LDB7P38210 180 aa3.35□□□□□ -1.87
CAF130YGR134W VBA2P38358 474 aaKnown RBP3.35□□□□□ -1.87
CAF130YGR134W YAL037WP39728 267 aa3.35□□□□□ -1.87
CAF130YGR134W YER184CP39961 794 aa3.35□□□□□ -1.87
CAF130YGR134W CWC23P52868 283 aaPredicted RBP3.35□□□□□ -1.87
CAF130YGR134W TRM44Q02648 567 aaKnown RBP3.35□□□□□ -1.87
CAF130YGR134W CTK1Q03957 528 aaKnown RBP3.35□□□□□ -1.87
CAF130YGR134W CAC2Q04199 468 aa3.35□□□□□ -1.87
CAF130YGR134W CMC2Q3E7A4 109 aa3.35□□□□□ -1.87
CAF130YGR134W CKI1P20485 582 aa3.35□□□□□ -1.87
CAF130YGR134W LAC1P28496 418 aa3.35□□□□□ -1.87
CAF130YGR134W GCG1P32656 232 aaKnown RBP3.35□□□□□ -1.87
CAF130YGR134W AIM26P32858 118 aa3.35□□□□□ -1.87
CAF130YGR134W YER130CP39959 443 aa3.35□□□□□ -1.87
CAF130YGR134W PCL6P40038 420 aa3.35□□□□□ -1.87
CAF130YGR134W TDA10P42938 290 aa3.35□□□□□ -1.87
CAF130YGR134W CTH1P47976 325 aa3.35□□□□□ -1.87
CAF130YGR134W COX18P53239 316 aa3.35□□□□□ -1.87
CAF130YGR134W NOP19P53317 196 aaPredicted RBP3.35□□□□□ -1.87
CAF130YGR134W YTP1P53584 459 aa3.35□□□□□ -1.87
CAF130YGR134W IRC4Q03036 179 aa3.35□□□□□ -1.87
CAF130YGR134W DCR2Q05924 578 aa3.35□□□□□ -1.87
CAF130YGR134W ASA1Q06822 443 aa3.35□□□□□ -1.87
CAF130YGR134W PAM18Q07914 168 aa3.35□□□□□ -1.87
CAF130YGR134W REX4Q08237 289 aa3.35□□□□□ -1.87
CAF130YGR134W RKM5Q12367 367 aa3.35□□□□□ -1.87
CAF130YGR134W QCR7P00128 127 aa3.34□□□□□ -1.87
CAF130YGR134W IMA3P0CW40 589 aa3.34□□□□□ -1.87
CAF130YGR134W IMA4P0CW41 589 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms