RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W PRP39P39682 629 aaKnown RBP3.15□□□□□ -1.91
LIF1YGL090W BUR6P40096 142 aa3.15□□□□□ -1.91
LIF1YGL090W YMR134WP40207 237 aa3.15□□□□□ -1.91
LIF1YGL090W HXT9P40885 567 aa3.15□□□□□ -1.91
LIF1YGL090W SWP82P43554 623 aa3.15□□□□□ -1.91
LIF1YGL090W SAD1P43589 448 aa3.15□□□□□ -1.91
LIF1YGL090W VMA10P48836 114 aaKnown RBP3.15□□□□□ -1.91
LIF1YGL090W YIP4P53093 235 aa3.15□□□□□ -1.91
LIF1YGL090W YGR079WP53249 370 aa3.15□□□□□ -1.91
LIF1YGL090W ATP23P53722 227 aa3.15□□□□□ -1.91
LIF1YGL090W OCA2P53949 197 aa3.15□□□□□ -1.91
LIF1YGL090W HXT11P54862 567 aa3.15□□□□□ -1.91
LIF1YGL090W SPP2Q02521 185 aa3.15□□□□□ -1.91
LIF1YGL090W IZH1Q03419 316 aa3.15□□□□□ -1.91
LIF1YGL090W UBX2Q04228 584 aa3.15□□□□□ -1.91
LIF1YGL090W ADH6Q04894 360 aaKnown RBP3.15□□□□□ -1.91
LIF1YGL090W SPO77Q06134 477 aa3.15□□□□□ -1.91
LIF1YGL090W MRPL35Q06678 367 aa3.15□□□□□ -1.91
LIF1YGL090W POS5Q06892 414 aa3.15□□□□□ -1.91
LIF1YGL090W DNL4Q08387 944 aaPredicted RBP3.15□□□□□ -1.91
LIF1YGL090W PEX27Q08580 376 aa3.15□□□□□ -1.91
LIF1YGL090W TIP41Q12199 356 aa3.15□□□□□ -1.91
LIF1YGL090W PRP46Q12417 451 aaPredicted RBP3.15□□□□□ -1.91
LIF1YGL090W PAA1Q12447 191 aaKnown RBP3.15□□□□□ -1.91
LIF1YGL090W UBA3Q99344 299 aa3.15□□□□□ -1.91
LIF1YGL090W AI5_BETAQ9ZZX0 354 aa3.15□□□□□ -1.91
LIF1YGL090W DNF2Q12675 1612 aa3.15□□□□□ -1.91
LIF1YGL090W ADE4P04046 510 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W GAL4P04386 881 aa3.14□□□□□ -1.91
LIF1YGL090W RHO1P06780 209 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W AQY1P0CD91 305 aa3.14□□□□□ -1.91
LIF1YGL090W MATALPHA1P0CY06 175 aa3.14□□□□□ -1.91
LIF1YGL090W HMLALPHA1P0CY07 175 aa3.14□□□□□ -1.91
LIF1YGL090W MATALPHA2P0CY08 210 aa3.14□□□□□ -1.91
LIF1YGL090W HMLALPHA2P0CY09 210 aa3.14□□□□□ -1.91
LIF1YGL090W FBA1P14540 359 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W SGV1P23293 657 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W PTC6P25646 442 aa3.14□□□□□ -1.91
LIF1YGL090W MEI4P29467 408 aa3.14□□□□□ -1.91
LIF1YGL090W SIN4P32259 974 aa3.14□□□□□ -1.91
LIF1YGL090W VMA6P32366 345 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W RAD23P32628 398 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W NRP1P32770 719 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
LIF1YGL090W PDR3P33200 976 aa3.14□□□□□ -1.91
LIF1YGL090W PRP18P33411 251 aaPredicted RBP3.14□□□□□ -1.91
LIF1YGL090W SOF1P33750 489 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W HES1P35843 434 aa3.14□□□□□ -1.91
LIF1YGL090W MRPL7P36519 292 aa3.14□□□□□ -1.91
LIF1YGL090W RTC2P38279 296 aa3.14□□□□□ -1.91
LIF1YGL090W PCA1P38360 1216 aa3.14□□□□□ -1.91
LIF1YGL090W IMD2P38697 523 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W SPC97P38863 823 aa3.14□□□□□ -1.91
LIF1YGL090W PFS1P38872 237 aa3.14□□□□□ -1.91
LIF1YGL090W LNP1P38878 278 aa3.14□□□□□ -1.91
LIF1YGL090W SOP4P39543 234 aaPredicted RBP3.14□□□□□ -1.91
LIF1YGL090W UTP25P40498 721 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W ERG10P41338 398 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W PSA1P41940 361 aaKnown RBP3.14□□□□□ -1.91
LIF1YGL090W ROG1P53118 685 aa3.14□□□□□ -1.91
LIF1YGL090W YGL108CP53139 140 aa3.14□□□□□ -1.91
LIF1YGL090W RRN9P53437 365 aa3.14□□□□□ -1.91
LIF1YGL090W SLG1P54867 378 aa3.14□□□□□ -1.91
LIF1YGL090W MRS2Q01926 470 aa3.14□□□□□ -1.91
LIF1YGL090W CTF19Q02732 369 aa3.14□□□□□ -1.91
LIF1YGL090W MRP51Q02950 344 aa3.14□□□□□ -1.91
LIF1YGL090W PEX12Q04370 399 aa3.14□□□□□ -1.91
LIF1YGL090W ARP10Q04549 284 aa3.14□□□□□ -1.91
LIF1YGL090W CYK3Q07533 885 aa3.14□□□□□ -1.91
LIF1YGL090W REX4Q08237 289 aa3.14□□□□□ -1.91
LIF1YGL090W RMD5Q12508 421 aa3.14□□□□□ -1.91
LIF1YGL090W ZPS1Q12512 249 aa3.14□□□□□ -1.91
LIF1YGL090W SPO24Q3E752 67 aa3.14□□□□□ -1.91
LIF1YGL090W YER175W-AQ8TGU4 54 aa3.14□□□□□ -1.91
LIF1YGL090W SCC2Q04002 1493 aa3.14□□□□□ -1.91
LIF1YGL090W SIN3P22579 1536 aa3.14□□□□□ -1.91
LIF1YGL090W COX3P00420 269 aa3.13□□□□□ -1.91
LIF1YGL090W PAB1P04147 577 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
LIF1YGL090W RPS3P05750 240 aaKnown RBP3.13□□□□□ -1.91
LIF1YGL090W GDH1P07262 454 aaKnown RBP3.13□□□□□ -1.91
LIF1YGL090W HEM1P09950 548 aaPredicted RBP3.13□□□□□ -1.91
LIF1YGL090W RPO26P20435 155 aa3.13□□□□□ -1.91
LIF1YGL090W GPI12P23797 304 aa3.13□□□□□ -1.91
LIF1YGL090W RFA2P26754 273 aaKnown RBP3.13□□□□□ -1.91
LIF1YGL090W SPO23P33757 523 aa3.13□□□□□ -1.91
LIF1YGL090W COS9P36034 407 aa3.13□□□□□ -1.91
LIF1YGL090W LDB7P38210 180 aa3.13□□□□□ -1.91
LIF1YGL090W FZO1P38297 855 aa3.13□□□□□ -1.91
LIF1YGL090W MMS21P38632 267 aa3.13□□□□□ -1.91
LIF1YGL090W GPI16P38875 610 aa3.13□□□□□ -1.91
LIF1YGL090W ELO1P39540 310 aa3.13□□□□□ -1.91
LIF1YGL090W GAT2P40209 560 aa3.13□□□□□ -1.91
LIF1YGL090W ATG27P46989 271 aa3.13□□□□□ -1.91
LIF1YGL090W RPC17P47076 161 aa3.13□□□□□ -1.91
LIF1YGL090W COX16P47081 118 aa3.13□□□□□ -1.91
LIF1YGL090W NPA3P47122 385 aa3.13□□□□□ -1.91
LIF1YGL090W IBA57P47158 497 aa3.13□□□□□ -1.91
LIF1YGL090W MSY1P48527 492 aa3.13□□□□□ -1.91
LIF1YGL090W YGL159WP53110 370 aa3.13□□□□□ -1.91
LIF1YGL090W GET1P53192 235 aa3.13□□□□□ -1.91
LIF1YGL090W MMT1Q03218 510 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms