RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	PHM6	Q05637	104 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	ATG38	Q05789	226 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	CRN1	Q06440	651 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
VTC2	YFL004W	GUP2	Q08929	609 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YLR049C	Q12110	428 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YDL199C	Q12407	687 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	PAA1	Q12447	191 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	HIS5	P07172	385 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	CDC4	P07834	779 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	SAM35	P14693	329 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	SIR1	P21691	654 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	MAG1	P22134	296 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	BEM1	P29366	551 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
VTC2	YFL004W	COX13	P32799	129 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	LHP1	P33399	275 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	TUL1	P36096	758 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	CAF4	P36130	643 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	MRPL36	P36531	177 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YBR238C	P38330	731 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	PRS3	P38689	320 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	MUP3	P38734	546 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	MEP1	P40260	492 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	SWM2	P40342	146 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	MAF1	P41910	395 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YFL052W	P43551	465 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	RPS7B	P48164	190 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	STR3	P53101	465 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	IMO32	P53219	342 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YNR062C	P53748	327 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	ODC1	Q03028	310 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	RKM2	Q03942	479 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	PLM2	Q04383	521 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YHC1	Q05900	231 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	UTP21	Q06078	939 aa	Predicted RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	FMP25	Q08023	583 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	MCA1	Q08601	432 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	VMA9	Q3E7B6	73 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YPK1	P12688	680 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	GSH1	P32477	678 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	DOA4	P32571	926 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	AVT5	P38176	459 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	YHR033W	P38690	423 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	NEM1	P38757	446 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	AIM18	P38884	321 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	UTP25	P40498	721 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	CHA4	P43634	648 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	IDS2	P46958	469 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	MRX5	P47007	382 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	JHD2	P47156	728 aa	Predicted RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	MCM22	P47167	239 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	GCV1	P48015	400 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	ASN1	P49089	572 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	SEH1	P53011	349 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	ROG1	P53118	685 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	RPN4	Q03465	531 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	CIA1	Q05583	330 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	TPO3	Q06451	622 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	RRP40	Q08285	240 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	PEP4	P07267	405 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	SDH2	P21801	266 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	CAT2	P32796	670 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	WBP1	P33767	430 aa	Known RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	NVJ1	P38881	321 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	AFG3	P39925	761 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	TOK1	P40310	691 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	MPM1	P40364	252 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	BAP3	P41815	604 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	YGR201C	P42936	225 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	CAK1	P43568	368 aa	Predicted RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	RRT5	P43607	289 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	GPI8	P49018	411 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	COS12	P53053	380 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	SIW14	P53965	281 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	YPL108W	Q02872	168 aa	Predicted RBP	5.19	□□□□□ -1.58
VTC2	YFL004W	KAP120	Q02932	1032 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	CYK3	Q07533	885 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	NBP2	Q12163	236 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	SIA1	Q12212	622 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	UBX3	Q12229	455 aa		5.19	□□□□□ -1.58
VTC2	YFL004W	ARG80	P07249	177 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	GLK1	P17709	500 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	MRPL44	P19956	98 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	TRX2	P22803	104 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	KIN82	P25341	720 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	KRR1	P25586	316 aa	Predicted RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	YUR1	P26725	428 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	COT1	P32798	439 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	ECT1	P33412	323 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	YKL162C	P36052	402 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	FLO10	P36170	1169 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	SCO2	P38072	301 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	GDI1	P39958	451 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	YGR127W	P53275	312 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	YNL018C	P53976	612 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	IDP3	P53982	420 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	TPP1	Q03796	238 aa		5.18	□□□□□ -1.58
VTC2	YFL004W	PAL1	Q05518	499 aa	Known RBP	5.18	□□□□□ -1.58
VTC2	YFL004W	MFG1	Q07684	458 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms