RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W FLO11P08640 1367 aa1.21□□□□□ -2.22
YCK3YER123W CLN1P20437 546 aa1.21□□□□□ -2.22
YCK3YER123W PPH22P23595 377 aa1.21□□□□□ -2.22
YCK3YER123W CTR86P25355 563 aa1.21□□□□□ -2.22
YCK3YER123W GFD2P25370 566 aaKnown RBP1.21□□□□□ -2.22
YCK3YER123W PRR1P28708 518 aa1.21□□□□□ -2.22
YCK3YER123W SIN4P32259 974 aa1.21□□□□□ -2.22
YCK3YER123W RFC3P38629 340 aa1.21□□□□□ -2.22
YCK3YER123W YPT35P38815 214 aaKnown RBP1.21□□□□□ -2.22
YCK3YER123W TIM17P39515 158 aa1.21□□□□□ -2.22
YCK3YER123W YIL029CP40538 142 aa1.21□□□□□ -2.22
YCK3YER123W CHS6P40955 746 aa1.21□□□□□ -2.22
YCK3YER123W SFH5P47008 294 aa1.21□□□□□ -2.22
YCK3YER123W BIR1P47134 954 aa1.21□□□□□ -2.22
YCK3YER123W GPI15P53961 229 aa1.21□□□□□ -2.22
YCK3YER123W TIM10P87108 93 aa1.21□□□□□ -2.22
YCK3YER123W SMF3Q12078 473 aaPredicted RBP1.21□□□□□ -2.22
YCK3YER123W COX4P04037 155 aa1.2□□□□□ -2.22
YCK3YER123W MSI1P13712 422 aa1.2□□□□□ -2.22
YCK3YER123W RPL3P14126 387 aaKnown RBP1.2□□□□□ -2.22
YCK3YER123W SPO12P17123 173 aa1.2□□□□□ -2.22
YCK3YER123W HXT3P32466 567 aaKnown RBP1.2□□□□□ -2.22
YCK3YER123W COX14P39103 70 aa1.2□□□□□ -2.22
YCK3YER123W OXA1P39952 402 aa1.2□□□□□ -2.22
YCK3YER123W YFR057WP43625 151 aa1.2□□□□□ -2.22
YCK3YER123W PHB2P50085 310 aa1.2□□□□□ -2.22
YCK3YER123W MNP1P53163 194 aaPredicted RBP1.2□□□□□ -2.22
YCK3YER123W MRPS16Q02608 121 aa1.2□□□□□ -2.22
YCK3YER123W OAZ1Q02803 292 aa1.2□□□□□ -2.22
YCK3YER123W VTA1Q06263 330 aa1.2□□□□□ -2.22
YCK3YER123W CMS1Q07897 291 aaKnown RBP1.2□□□□□ -2.22
YCK3YER123W DNL4Q08387 944 aaPredicted RBP1.2□□□□□ -2.22
YCK3YER123W SRL2Q12020 392 aa1.2□□□□□ -2.22
YCK3YER123W RRG1Q12167 365 aaPredicted RBP1.2□□□□□ -2.22
YCK3YER123W YPS3Q12303 508 aa1.2□□□□□ -2.22
YCK3YER123W ARG3P05150 338 aa1.19□□□□□ -2.22
YCK3YER123W RPS24AP0CX31 135 aaKnown RBP1.19□□□□□ -2.22
YCK3YER123W RPS24BP0CX32 135 aaKnown RBP1.19□□□□□ -2.22
YCK3YER123W RPB5P20434 215 aa1.19□□□□□ -2.22
YCK3YER123W RHB1P25378 209 aa1.19□□□□□ -2.22
YCK3YER123W IMP2'P32351 346 aa1.19□□□□□ -2.22
YCK3YER123W CYS4P32582 507 aaKnown RBP1.19□□□□□ -2.22
YCK3YER123W SBE22P38814 852 aa1.19□□□□□ -2.22
YCK3YER123W UTP9P38882 575 aaKnown RBP1.19□□□□□ -2.22
YCK3YER123W BAT1P38891 393 aaKnown RBP1.19□□□□□ -2.22
YCK3YER123W ARF3P40994 183 aaRIP-Chip data1.19□□□□□ -2.22not detected
YCK3YER123W RPS0BP46654 252 aaKnown RBP1.19□□□□□ -2.22
YCK3YER123W FMS1P50264 508 aa1.19□□□□□ -2.22
YCK3YER123W FLC3P53121 802 aa1.19□□□□□ -2.22
YCK3YER123W CRH1P53301 507 aa1.19□□□□□ -2.22
YCK3YER123W GIP3Q03016 1276 aa1.19□□□□□ -2.22
YCK3YER123W TAF12Q03761 539 aa1.19□□□□□ -2.22
YCK3YER123W MDM30Q05930 598 aa1.19□□□□□ -2.22
YCK3YER123W SIL1Q08199 421 aa1.19□□□□□ -2.22
YCK3YER123W RAX1Q08760 435 aa1.19□□□□□ -2.22
YCK3YER123W TY3A-GQ12173 290 aa1.19□□□□□ -2.22
YCK3YER123W HSP42Q12329 375 aa1.19□□□□□ -2.22
YCK3YER123W TY3A-IQ99219 290 aa1.19□□□□□ -2.22
YCK3YER123W CBP6P07253 162 aaPredicted RBP1.18□□□□□ -2.22
YCK3YER123W RPL43AP0CX25 92 aaKnown RBP1.18□□□□□ -2.22
YCK3YER123W RPL43BP0CX26 92 aa1.18□□□□□ -2.22
YCK3YER123W OSM1P21375 501 aaKnown RBP1.18□□□□□ -2.22
YCK3YER123W YCL068CP25593 260 aa1.18□□□□□ -2.22
YCK3YER123W KRE2P27809 442 aa1.18□□□□□ -2.22
YCK3YER123W BEM1P29366 551 aa1.18□□□□□ -2.22
YCK3YER123W DPH2P32461 534 aa1.18□□□□□ -2.22
YCK3YER123W RRP1P35178 278 aaPredicted RBP1.18□□□□□ -2.22
YCK3YER123W YAL037WP39728 267 aa1.18□□□□□ -2.22
YCK3YER123W YPS5P53057 165 aa1.18□□□□□ -2.22
YCK3YER123W YET2Q04210 160 aa1.18□□□□□ -2.22
YCK3YER123W RTN1Q04947 295 aaKnown RBP1.18□□□□□ -2.22
YCK3YER123W YGK3Q12222 375 aaPredicted RBP1.18□□□□□ -2.22
YCK3YER123W TPT1Q12272 230 aaKnown RBP1.18□□□□□ -2.22
YCK3YER123W PRM7Q12459 698 aa1.18□□□□□ -2.22
YCK3YER123W MSB2P32334 1306 aa1.18□□□□□ -2.22
YCK3YER123W SCEIP03882 235 aa1.17□□□□□ -2.22
YCK3YER123W CDC50P25656 391 aa1.17□□□□□ -2.22
YCK3YER123W SOR1P35497 357 aaKnown RBP1.17□□□□□ -2.22
YCK3YER123W YBR056WP38081 501 aa1.17□□□□□ -2.22
YCK3YER123W OM14P38325 134 aa1.17□□□□□ -2.22
YCK3YER123W SMF1P38925 575 aa1.17□□□□□ -2.22
YCK3YER123W EGT2P42835 1041 aa1.17□□□□□ -2.22
YCK3YER123W BNS1P50084 137 aa1.17□□□□□ -2.22
YCK3YER123W MRM2P53123 320 aa1.17□□□□□ -2.22
YCK3YER123W MST27P53176 234 aa1.17□□□□□ -2.22
YCK3YER123W SVL3Q03088 825 aaKnown RBP1.17□□□□□ -2.22
YCK3YER123W GYL1Q04322 720 aa1.17□□□□□ -2.22
YCK3YER123W MDM36Q06820 579 aa1.17□□□□□ -2.22
YCK3YER123W SOR2Q07786 357 aa1.17□□□□□ -2.22
YCK3YER123W VAM3Q12241 283 aa1.17□□□□□ -2.22
YCK3YER123W ADH1P00330 348 aaKnown RBP1.17□□□□□ -2.22
YCK3YER123W POT1P27796 417 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
YCK3YER123W PHA2P32452 334 aa1.17□□□□□ -2.22
YCK3YER123W GPI18P38211 433 aa1.17□□□□□ -2.22
YCK3YER123W ALD5P40047 520 aaKnown RBP1.17□□□□□ -2.22
YCK3YER123W HAC1P41546 238 aa1.17□□□□□ -2.22
YCK3YER123W ATG18P43601 500 aa1.17□□□□□ -2.22
YCK3YER123W DLD2P46681 530 aaKnown RBP1.17□□□□□ -2.22
YCK3YER123W PHO86P46956 311 aa1.17□□□□□ -2.22
YCK3YER123W LCB3P47013 409 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms