RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C MCH1Q07376 486 aa1.5□□□□□ -2.17
PCF11YDR228C MED2Q12124 431 aa1.5□□□□□ -2.17
PCF11YDR228C RUP1Q12242 671 aa1.5□□□□□ -2.17
PCF11YDR228C YDL199CQ12407 687 aa1.5□□□□□ -2.17
PCF11YDR228C YOL085CQ99345 113 aa1.5□□□□□ -2.17
PCF11YDR228C POM152P39685 1337 aa1.5□□□□□ -2.17
PCF11YDR228C STE7P06784 515 aa1.5□□□□□ -2.17
PCF11YDR228C PUT4P15380 627 aa1.5□□□□□ -2.17
PCF11YDR228C GIT1P25346 518 aa1.5□□□□□ -2.17
PCF11YDR228C YCR051WP25631 222 aa1.5□□□□□ -2.17
PCF11YDR228C MSP1P28737 362 aa1.5□□□□□ -2.17
PCF11YDR228C NDE1P40215 560 aa1.5□□□□□ -2.17
PCF11YDR228C AIP1P46680 615 aaKnown RBP1.5□□□□□ -2.17
PCF11YDR228C YGR117CP53270 476 aa1.5□□□□□ -2.17
PCF11YDR228C ALF1P53904 254 aa1.5□□□□□ -2.17
PCF11YDR228C ROY1Q04847 553 aa1.5□□□□□ -2.17
PCF11YDR228C MMR1Q06324 491 aa1.5□□□□□ -2.17
PCF11YDR228C YDR061WQ12298 539 aa1.5□□□□□ -2.17
PCF11YDR228C ATP1P07251 545 aaKnown RBP1.49□□□□□ -2.17
PCF11YDR228C RAD5P32849 1169 aaPredicted RBP1.49□□□□□ -2.17
PCF11YDR228C STN1P38960 494 aa1.49□□□□□ -2.17
PCF11YDR228C DIA1P54005 336 aa1.49□□□□□ -2.17
PCF11YDR228C YHC1Q05900 231 aaKnown RBP1.49□□□□□ -2.17
PCF11YDR228C MTR10Q99189 972 aa1.49□□□□□ -2.17
PCF11YDR228C SKN1P33336 771 aa1.48□□□□□ -2.17
PCF11YDR228C GPX2P38143 162 aa1.48□□□□□ -2.17
PCF11YDR228C LSM12P38828 187 aaKnown RBP1.48□□□□□ -2.17
PCF11YDR228C YER184CP39961 794 aa1.48□□□□□ -2.17
PCF11YDR228C TIR4Q12218 487 aaPredicted RBP1.48□□□□□ -2.17
PCF11YDR228C SFI1Q12369 946 aa1.48□□□□□ -2.17
PCF11YDR228C CMK2P22517 447 aa1.48□□□□□ -2.17
PCF11YDR228C SKT5P34226 696 aa1.48□□□□□ -2.17
PCF11YDR228C NOC2P39744 710 aaKnown RBP1.48□□□□□ -2.17
PCF11YDR228C VHS2P40463 436 aa1.48□□□□□ -2.17
PCF11YDR228C CPR7P47103 393 aa1.48□□□□□ -2.17
PCF11YDR228C STE24P47154 453 aa1.48□□□□□ -2.17
PCF11YDR228C TOS2P50078 622 aa1.48□□□□□ -2.17
PCF11YDR228C RRN9P53437 365 aa1.48□□□□□ -2.17
PCF11YDR228C BNI5P53890 448 aaKnown RBP1.48□□□□□ -2.17
PCF11YDR228C SPR6Q01684 191 aa1.48□□□□□ -2.17
PCF11YDR228C YLR345WQ06137 509 aa1.48□□□□□ -2.17
PCF11YDR228C TSR2Q06672 205 aaKnown RBP1.48□□□□□ -2.17
PCF11YDR228C SCM3Q12334 223 aa1.48□□□□□ -2.17
PCF11YDR228C APC2Q12440 853 aa1.48□□□□□ -2.17
PCF11YDR228C YRF1-4O13559 1382 aa1.48□□□□□ -2.17
PCF11YDR228C REC107P21651 314 aa1.47□□□□□ -2.17
PCF11YDR228C URA7P28274 579 aaKnown RBP1.47□□□□□ -2.17
PCF11YDR228C TOA1P32773 286 aa1.47□□□□□ -2.17
PCF11YDR228C TOA2P32774 122 aa1.47□□□□□ -2.17
PCF11YDR228C AGA2P32781 87 aa1.47□□□□□ -2.17
PCF11YDR228C MCR1P36060 302 aaKnown RBP1.47□□□□□ -2.17
PCF11YDR228C HEL1P36113 551 aa1.47□□□□□ -2.17
PCF11YDR228C FHL1P39521 936 aa1.47□□□□□ -2.17
PCF11YDR228C FRT2P39734 528 aa1.47□□□□□ -2.17
PCF11YDR228C SPO73P40031 143 aa1.47□□□□□ -2.17
PCF11YDR228C YER079WP40052 210 aaKnown RBP1.47□□□□□ -2.17
PCF11YDR228C CAK1P43568 368 aaPredicted RBP1.47□□□□□ -2.17
PCF11YDR228C RRP46P53256 223 aaPredicted RBP1.47□□□□□ -2.17
PCF11YDR228C PRP3Q03338 469 aaPredicted RBP1.47□□□□□ -2.17
PCF11YDR228C ENT5Q03769 411 aaKnown RBP1.47□□□□□ -2.17
PCF11YDR228C YLR287CQ05881 355 aa1.47□□□□□ -2.17
PCF11YDR228C YPR195CQ06594 109 aa1.47□□□□□ -2.17
PCF11YDR228C CDC31P06704 161 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C DST1P07273 309 aa1.46□□□□□ -2.18
PCF11YDR228C RPS19AP07280 144 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C RPS19BP07281 144 aaPredicted RBP1.46□□□□□ -2.18
PCF11YDR228C PDC2P32896 925 aa1.46□□□□□ -2.18
PCF11YDR228C SPO23P33757 523 aa1.46□□□□□ -2.18
PCF11YDR228C PTK1P36002 662 aaPredicted RBP1.46□□□□□ -2.18
PCF11YDR228C SLM4P38247 162 aa1.46□□□□□ -2.18
PCF11YDR228C GPI16P38875 610 aa1.46□□□□□ -2.18
PCF11YDR228C PEX22P39718 180 aa1.46□□□□□ -2.18
PCF11YDR228C GPD2P41911 440 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C VAC7P53950 1165 aa1.46□□□□□ -2.18
PCF11YDR228C PRP38Q00723 242 aaPredicted RBP1.46□□□□□ -2.18
PCF11YDR228C YMR155WQ03795 547 aa1.46□□□□□ -2.18
PCF11YDR228C YDR341CQ05506 607 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C SFM1Q12314 213 aa1.46□□□□□ -2.18
PCF11YDR228C HTZ1Q12692 134 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C AFI1Q99222 893 aa1.46□□□□□ -2.18
PCF11YDR228C CHA1P25379 360 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C ADK2P26364 225 aa1.46□□□□□ -2.18
PCF11YDR228C SMP1P38128 452 aa1.46□□□□□ -2.18
PCF11YDR228C OLA1P38219 394 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C SER3P40054 469 aa1.46□□□□□ -2.18
PCF11YDR228C MMF1P40185 145 aaKnown RBP1.46□□□□□ -2.18
PCF11YDR228C RPN14P53196 417 aa1.46□□□□□ -2.18
PCF11YDR228C HST4P53688 370 aa1.46□□□□□ -2.18
PCF11YDR228C RPS18AP0CX55 146 aaKnown RBP1.45□□□□□ -2.18
PCF11YDR228C RPS18BP0CX56 146 aaPredicted RBP1.45□□□□□ -2.18
PCF11YDR228C HSP104P31539 908 aaKnown RBP1.45□□□□□ -2.18
PCF11YDR228C SOL2P37262 315 aa1.45□□□□□ -2.18
PCF11YDR228C HEM14P40012 539 aa1.45□□□□□ -2.18
PCF11YDR228C ABM1P47146 123 aa1.45□□□□□ -2.18
PCF11YDR228C COQ5P49017 307 aa1.45□□□□□ -2.18
PCF11YDR228C ASN2P49090 572 aaKnown RBP1.45□□□□□ -2.18
PCF11YDR228C YDR131CQ03899 556 aa1.45□□□□□ -2.18
PCF11YDR228C MSC3Q05812 728 aa1.45□□□□□ -2.18
PCF11YDR228C YLR177WQ06251 628 aa1.45□□□□□ -2.18
PCF11YDR228C RNH203Q12338 110 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms