RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C SMF2P38778 549 aa4.32□□□□□ -1.72
SPR28YDR218C RRP4P38792 359 aaKnown RBP4.32□□□□□ -1.72
SPR28YDR218C TDA11P38854 504 aa4.32□□□□□ -1.72
SPR28YDR218C PRM9P39551 298 aa4.32□□□□□ -1.72
SPR28YDR218C SEC72P39742 193 aaKnown RBP4.32□□□□□ -1.72
SPR28YDR218C YIL001WP40560 513 aa4.32□□□□□ -1.72
SPR28YDR218C SNG1P46950 547 aa4.32□□□□□ -1.72
SPR28YDR218C PHO86P46956 311 aa4.32□□□□□ -1.72
SPR28YDR218C FMP33P46998 180 aa4.32□□□□□ -1.72
SPR28YDR218C COX16P47081 118 aa4.32□□□□□ -1.72
SPR28YDR218C YDL186WP48568 277 aa4.32□□□□□ -1.72
SPR28YDR218C NMA2P53204 395 aa4.32□□□□□ -1.72
SPR28YDR218C NOP13P53883 403 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SPR28YDR218C YMR209CQ03648 457 aa4.32□□□□□ -1.72
SPR28YDR218C HSP31Q04432 237 aa4.32□□□□□ -1.72
SPR28YDR218C GRS2Q06817 618 aa4.32□□□□□ -1.72
SPR28YDR218C CMS1Q07897 291 aaKnown RBP4.32□□□□□ -1.72
SPR28YDR218C YAP7Q08182 245 aa4.32□□□□□ -1.72
SPR28YDR218C OSW1Q08692 278 aa4.32□□□□□ -1.72
SPR28YDR218C SAM4Q08985 325 aaKnown RBP4.32□□□□□ -1.72
SPR28YDR218C SRO7Q12038 1033 aa4.32□□□□□ -1.72
SPR28YDR218C SIA1Q12212 622 aa4.32□□□□□ -1.72
SPR28YDR218C YOR029WQ12243 111 aa4.32□□□□□ -1.72
SPR28YDR218C ZPS1Q12512 249 aa4.32□□□□□ -1.72
SPR28YDR218C RPN13O13563 156 aa4.31□□□□□ -1.72
SPR28YDR218C HIS4P00815 799 aaKnown RBP4.31□□□□□ -1.72
SPR28YDR218C PEP4P07267 405 aaKnown RBP4.31□□□□□ -1.72
SPR28YDR218C CKA2P19454 339 aa4.31□□□□□ -1.72
SPR28YDR218C CMK2P22517 447 aa4.31□□□□□ -1.72
SPR28YDR218C DBR1P24309 405 aaKnown RBP4.31□□□□□ -1.72
SPR28YDR218C RRT12P25381 491 aa4.31□□□□□ -1.72
SPR28YDR218C PTC6P25646 442 aa4.31□□□□□ -1.72
SPR28YDR218C ACP1P32463 125 aa4.31□□□□□ -1.72
SPR28YDR218C PRP21P32524 280 aaPredicted RBP4.31□□□□□ -1.72
SPR28YDR218C TMT1P32643 299 aa4.31□□□□□ -1.72
SPR28YDR218C GCG1P32656 232 aaKnown RBP4.31□□□□□ -1.72
SPR28YDR218C COS9P36034 407 aa4.31□□□□□ -1.72
SPR28YDR218C DOA1P36037 715 aa4.31□□□□□ -1.72
SPR28YDR218C HIS2P38635 335 aa4.31□□□□□ -1.72
SPR28YDR218C YHR177WP38867 453 aa4.31□□□□□ -1.72
SPR28YDR218C FHL1P39521 936 aa4.31□□□□□ -1.72
SPR28YDR218C PAC2P39937 518 aa4.31□□□□□ -1.72
SPR28YDR218C DSE1P40077 573 aa4.31□□□□□ -1.72
SPR28YDR218C YMR134WP40207 237 aa4.31□□□□□ -1.72
SPR28YDR218C LYS12P40495 371 aaKnown RBP4.31□□□□□ -1.72
SPR28YDR218C IZH1Q03419 316 aa4.31□□□□□ -1.72
SPR28YDR218C RVB1Q03940 463 aaKnown RBP4.31□□□□□ -1.72
SPR28YDR218C SDO1Q07953 250 aaKnown RBP4.31□□□□□ -1.72
SPR28YDR218C SMC5Q08204 1093 aa4.31□□□□□ -1.72
SPR28YDR218C REX4Q08237 289 aa4.31□□□□□ -1.72
SPR28YDR218C YOL159CQ08300 171 aa4.31□□□□□ -1.72
SPR28YDR218C GEP3Q08622 556 aa4.31□□□□□ -1.72
SPR28YDR218C YLL056CQ12177 298 aa4.31□□□□□ -1.72
SPR28YDR218C NCB2Q92317 146 aa4.31□□□□□ -1.72
SPR28YDR218C COX2P00410 251 aa4.3□□□□□ -1.72
SPR28YDR218C CHS1P08004 1131 aa4.3□□□□□ -1.72
SPR28YDR218C WHI2P12611 486 aa4.3□□□□□ -1.72
SPR28YDR218C TYR1P20049 452 aa4.3□□□□□ -1.72
SPR28YDR218C RNR3P21672 869 aaKnown RBP4.3□□□□□ -1.72
SPR28YDR218C CNA1P23287 553 aa4.3□□□□□ -1.72
SPR28YDR218C DPB2P24482 689 aaPredicted RBP4.3□□□□□ -1.72
SPR28YDR218C ACH1P32316 526 aa4.3□□□□□ -1.72
SPR28YDR218C SAC1P32368 623 aaKnown RBP4.3□□□□□ -1.72
SPR28YDR218C LDB7P38210 180 aa4.3□□□□□ -1.72
SPR28YDR218C TCM62P38228 572 aaKnown RBP4.3□□□□□ -1.72
SPR28YDR218C PFS1P38872 237 aa4.3□□□□□ -1.72
SPR28YDR218C MMF1P40185 145 aaKnown RBP4.3□□□□□ -1.72
SPR28YDR218C YAR1P46683 200 aa4.3□□□□□ -1.72
SPR28YDR218C YGR067CP53243 804 aa4.3□□□□□ -1.72
SPR28YDR218C SSU72P53538 206 aaPredicted RBP4.3□□□□□ -1.72
SPR28YDR218C YIF1P53845 314 aaKnown RBP4.3□□□□□ -1.72
SPR28YDR218C YNL092WP53934 400 aa4.3□□□□□ -1.72
SPR28YDR218C PRM15Q03262 622 aa4.3□□□□□ -1.72
SPR28YDR218C SMP3Q04174 516 aa4.3□□□□□ -1.72
SPR28YDR218C UBX2Q04228 584 aa4.3□□□□□ -1.72
SPR28YDR218C YMR087WQ04299 284 aa4.3□□□□□ -1.72
SPR28YDR218C KRE28Q04431 385 aa4.3□□□□□ -1.72
SPR28YDR218C AIM33Q04516 312 aa4.3□□□□□ -1.72
SPR28YDR218C RTT103Q05543 409 aa4.3□□□□□ -1.72
SPR28YDR218C BRX1Q08235 291 aaKnown RBP4.3□□□□□ -1.72
SPR28YDR218C ERP3Q12403 225 aa4.3□□□□□ -1.72
SPR28YDR218C AHA1Q12449 350 aaKnown RBP4.3□□□□□ -1.72
SPR28YDR218C RHO1P06780 209 aaKnown RBP4.29□□□□□ -1.72
SPR28YDR218C ARF1P11076 181 aaKnown RBP4.29□□□□□ -1.72
SPR28YDR218C CBF1P17106 351 aa4.29□□□□□ -1.72
SPR28YDR218C MET16P18408 261 aaPredicted RBP4.29□□□□□ -1.72
SPR28YDR218C UTR1P21373 530 aa4.29□□□□□ -1.72
SPR28YDR218C ERG9P29704 444 aa4.29□□□□□ -1.72
SPR28YDR218C VMA6P32366 345 aaKnown RBP4.29□□□□□ -1.72
SPR28YDR218C APE2P32454 952 aaKnown RBP4.29□□□□□ -1.72
SPR28YDR218C PRP18P33411 251 aaPredicted RBP4.29□□□□□ -1.72
SPR28YDR218C MTR2P34232 184 aaKnown RBP4.29□□□□□ -1.72
SPR28YDR218C AST1P35183 429 aa4.29□□□□□ -1.72
SPR28YDR218C PRS4P38063 326 aaPredicted RBP4.29□□□□□ -1.72
SPR28YDR218C YPT10P38146 199 aa4.29□□□□□ -1.72
SPR28YDR218C BIG1P38813 335 aa4.29□□□□□ -1.72
SPR28YDR218C BTT1P40314 149 aaPredicted RBP4.29□□□□□ -1.72
SPR28YDR218C DSN1P40568 576 aa4.29□□□□□ -1.72
SPR28YDR218C YPS6P40583 537 aa4.29□□□□□ -1.72
SPR28YDR218C SAS2P40963 338 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 76.9 ms