RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C REC107P21651 314 aa1.28□□□□□ -2.2
CSN9YDR179C ROX1P25042 368 aa1.28□□□□□ -2.2
CSN9YDR179C AST1P35183 429 aa1.28□□□□□ -2.2
CSN9YDR179C YPS6P40583 537 aa1.28□□□□□ -2.2
CSN9YDR179C TIM10P87108 93 aa1.28□□□□□ -2.2
CSN9YDR179C KAP120Q02932 1032 aa1.28□□□□□ -2.2
CSN9YDR179C ENT5Q03769 411 aaKnown RBP1.28□□□□□ -2.2
CSN9YDR179C DON1Q05610 365 aa1.28□□□□□ -2.2
CSN9YDR179C IMA2Q08295 589 aa1.28□□□□□ -2.2
CSN9YDR179C TIR4Q12218 487 aaPredicted RBP1.28□□□□□ -2.2
CSN9YDR179C YDL199CQ12407 687 aa1.28□□□□□ -2.2
CSN9YDR179C PCL9Q12477 304 aa1.28□□□□□ -2.2
CSN9YDR179C CKA2P19454 339 aa1.27□□□□□ -2.21
CSN9YDR179C EPT1P22140 391 aa1.27□□□□□ -2.21
CSN9YDR179C AGA2P32781 87 aa1.27□□□□□ -2.21
CSN9YDR179C SKT5P34226 696 aa1.27□□□□□ -2.21
CSN9YDR179C TRR2P38816 342 aa1.27□□□□□ -2.21
CSN9YDR179C NOC2P39744 710 aaKnown RBP1.27□□□□□ -2.21
CSN9YDR179C IRC6P43615 237 aa1.27□□□□□ -2.21
CSN9YDR179C YGR117CP53270 476 aa1.27□□□□□ -2.21
CSN9YDR179C TRM112P53738 135 aaPredicted RBP1.27□□□□□ -2.21
CSN9YDR179C COS1P53822 381 aa1.27□□□□□ -2.21
CSN9YDR179C SPR6Q01684 191 aa1.27□□□□□ -2.21
CSN9YDR179C YMR010WQ03687 405 aa1.27□□□□□ -2.21
CSN9YDR179C RPN9Q04062 393 aaKnown RBP1.27□□□□□ -2.21
CSN9YDR179C VTI1Q04338 217 aa1.27□□□□□ -2.21
CSN9YDR179C DDC1Q08949 612 aa1.27□□□□□ -2.21
CSN9YDR179C HIF1Q12373 385 aa1.27□□□□□ -2.21
CSN9YDR179C BRF1P29056 596 aa1.26□□□□□ -2.21
CSN9YDR179C ECM8P38246 354 aa1.26□□□□□ -2.21
CSN9YDR179C YGP1P38616 354 aaKnown RBP1.26□□□□□ -2.21
CSN9YDR179C MMF1P40185 145 aaKnown RBP1.26□□□□□ -2.21
CSN9YDR179C YJL144WP47009 104 aa1.26□□□□□ -2.21
CSN9YDR179C TRF5P48561 642 aaKnown RBP1.26□□□□□ -2.21
CSN9YDR179C VEL1P53058 206 aa1.26□□□□□ -2.21
CSN9YDR179C ZRG17P53735 605 aa1.26□□□□□ -2.21
CSN9YDR179C YMR130WQ04223 302 aa1.26□□□□□ -2.21
CSN9YDR179C MRX8Q05473 314 aa1.26□□□□□ -2.21
CSN9YDR179C SNT309Q06091 175 aaPredicted RBP1.26□□□□□ -2.21
CSN9YDR179C DCS1Q06151 350 aa1.26□□□□□ -2.21
CSN9YDR179C HRT1Q08273 121 aa1.26□□□□□ -2.21
CSN9YDR179C SFM1Q12314 213 aa1.26□□□□□ -2.21
CSN9YDR179C MED1Q12321 566 aa1.26□□□□□ -2.21
CSN9YDR179C MET17P06106 444 aa1.25□□□□□ -2.21
CSN9YDR179C DST1P07273 309 aa1.25□□□□□ -2.21
CSN9YDR179C RPS18AP0CX55 146 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C RPS18BP0CX56 146 aaPredicted RBP1.25□□□□□ -2.21
CSN9YDR179C ALG1P16661 449 aa1.25□□□□□ -2.21
CSN9YDR179C URA4P20051 364 aa1.25□□□□□ -2.21
CSN9YDR179C LDS1P31379 325 aa1.25□□□□□ -2.21
CSN9YDR179C OLA1P38219 394 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C SHE3P38272 425 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C WSC4P38739 605 aa1.25□□□□□ -2.21
CSN9YDR179C FHL1P39521 936 aa1.25□□□□□ -2.21
CSN9YDR179C YER079WP40052 210 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C CWC22P53333 577 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C REX2P54964 269 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C PRP38Q00723 242 aaPredicted RBP1.25□□□□□ -2.21
CSN9YDR179C PRP42Q03776 544 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C INP2Q03824 705 aa1.25□□□□□ -2.21
CSN9YDR179C MSC3Q05812 728 aa1.25□□□□□ -2.21
CSN9YDR179C FAR10Q06001 478 aa1.25□□□□□ -2.21
CSN9YDR179C MEX67Q99257 599 aaKnown RBP1.25□□□□□ -2.21
CSN9YDR179C CLB1P24868 471 aa1.24□□□□□ -2.21
CSN9YDR179C RAD23P32628 398 aaKnown RBP1.24□□□□□ -2.21
CSN9YDR179C PDC2P32896 925 aa1.24□□□□□ -2.21
CSN9YDR179C SPO23P33757 523 aa1.24□□□□□ -2.21
CSN9YDR179C SRB2P34162 210 aa1.24□□□□□ -2.21
CSN9YDR179C MCR1P36060 302 aaKnown RBP1.24□□□□□ -2.21
CSN9YDR179C RNH201P53942 307 aa1.24□□□□□ -2.21
CSN9YDR179C YDR115WQ04598 105 aa1.24□□□□□ -2.21
CSN9YDR179C YLR177WQ06251 628 aa1.24□□□□□ -2.21
CSN9YDR179C SRO7Q12038 1033 aa1.24□□□□□ -2.21
CSN9YDR179C RTN2Q12443 393 aa1.24□□□□□ -2.21
CSN9YDR179C SSC1P0CS90 654 aaKnown RBP1.23□□□□□ -2.21
CSN9YDR179C FUS3P16892 353 aaKnown RBP1.23□□□□□ -2.21
CSN9YDR179C HSP104P31539 908 aaKnown RBP1.23□□□□□ -2.21
CSN9YDR179C ERG3P32353 365 aa1.23□□□□□ -2.21
CSN9YDR179C SPS19P32573 292 aaKnown RBP1.23□□□□□ -2.21
CSN9YDR179C UTR5P32630 166 aa1.23□□□□□ -2.21
CSN9YDR179C TOA1P32773 286 aa1.23□□□□□ -2.21
CSN9YDR179C SAS3P34218 831 aa1.23□□□□□ -2.21
CSN9YDR179C FRM2P37261 193 aa1.23□□□□□ -2.21
CSN9YDR179C STB1P42845 420 aa1.23□□□□□ -2.21
CSN9YDR179C COS4P43542 379 aa1.23□□□□□ -2.21
CSN9YDR179C SEH1P53011 349 aaKnown RBP1.23□□□□□ -2.21
CSN9YDR179C RPT4P53549 437 aaKnown RBP1.23□□□□□ -2.21
CSN9YDR179C YHC1Q05900 231 aaKnown RBP1.23□□□□□ -2.21
CSN9YDR179C SFI1Q12369 946 aa1.23□□□□□ -2.21
CSN9YDR179C MTR10Q99189 972 aa1.23□□□□□ -2.21
CSN9YDR179C YOR338WQ99326 363 aa1.23□□□□□ -2.21
CSN9YDR179C YOL085CQ99345 113 aa1.23□□□□□ -2.21
CSN9YDR179C AUS1Q08409 1394 aa1.22□□□□□ -2.21
CSN9YDR179C COS9P36034 407 aa1.22□□□□□ -2.21
CSN9YDR179C SMP1P38128 452 aa1.22□□□□□ -2.21
CSN9YDR179C TOM22P49334 152 aa1.22□□□□□ -2.21
CSN9YDR179C MRPL19P53875 158 aa1.22□□□□□ -2.21
CSN9YDR179C OCA2P53949 197 aa1.22□□□□□ -2.21
CSN9YDR179C VAC7P53950 1165 aa1.22□□□□□ -2.21
CSN9YDR179C PRP3Q03338 469 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms