RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	ATM1	P40416	690 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	EGT2	P42835	1041 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	ABM1	P47146	123 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	RTT102	P53330	157 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	MDG1	P53885	366 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	APJ1	P53940	528 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	MTQ1	P53944	314 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	SPR6	Q01684	191 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	PRP3	Q03338	469 aa	Predicted RBP	2.72	□□□□□ -1.97
SLU7	YDR088C	RIF2	Q06208	395 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	MFG1	Q07684	458 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	SMF3	Q12078	473 aa	Predicted RBP	2.72	□□□□□ -1.97
SLU7	YDR088C	YGK3	Q12222	375 aa	Predicted RBP	2.72	□□□□□ -1.97
SLU7	YDR088C	YCR024C-B	Q3E7Z8	88 aa		2.72	□□□□□ -1.97
SLU7	YDR088C	MSI1	P13712	422 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	SKT5	P34226	696 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	ADH5	P38113	351 aa	Known RBP	2.71	□□□□□ -1.98
SLU7	YDR088C	PTI1	P39927	425 aa	Predicted RBP	2.71	□□□□□ -1.98
SLU7	YDR088C	AIM10	P39965	576 aa	Known RBP	2.71	□□□□□ -1.98
SLU7	YDR088C	ASN2	P49090	572 aa	Known RBP	2.71	□□□□□ -1.98
SLU7	YDR088C	SDT1	P53078	280 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	MLC1	P53141	149 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	RCF1	Q03713	159 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	RTN1	Q04947	295 aa	Known RBP	2.71	□□□□□ -1.98
SLU7	YDR088C	PAL1	Q05518	499 aa	Known RBP	2.71	□□□□□ -1.98
SLU7	YDR088C	IPK1	Q06667	281 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	NDE2	Q07500	545 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	YOP1	Q12402	180 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	EAF3	Q12432	401 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	FRE6	Q12473	712 aa		2.71	□□□□□ -1.98
SLU7	YDR088C	DAP2	P18962	818 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	DOA1	P36037	715 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	KAP104	P38217	918 aa	Known RBP	2.7	□□□□□ -1.98
SLU7	YDR088C	APE4	P38821	490 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	MIG3	P39943	394 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	EPL1	P43572	832 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	BIR1	P47134	954 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	BNS1	P50084	137 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	YLR152C	P54072	576 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	ADA2	Q02336	434 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	YPL107W	Q02873	248 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	AAD15	Q08361	143 aa		2.7	□□□□□ -1.98
SLU7	YDR088C	WTM1	Q12363	437 aa	Known RBP	2.7	□□□□□ -1.98
SLU7	YDR088C	ARF1	P11076	181 aa	Known RBP	2.69	□□□□□ -1.98
SLU7	YDR088C	RNA1	P11745	407 aa	Known RBP	2.69	□□□□□ -1.98
SLU7	YDR088C	MSP1	P28737	362 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	MCR1	P36060	302 aa	Known RBP	2.69	□□□□□ -1.98
SLU7	YDR088C	WSS1	P38838	269 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	BAT1	P38891	393 aa	Known RBP	2.69	□□□□□ -1.98
SLU7	YDR088C	GAB1	P41733	394 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	AIM24	P47127	394 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	MST27	P53176	234 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	YMR102C	Q03177	834 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	SMC5	Q08204	1093 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	LDS2	Q08218	356 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	PLP2	Q12017	286 aa		2.69	□□□□□ -1.98
SLU7	YDR088C	PIS1	P06197	220 aa	Known RBP	2.68	□□□□□ -1.98
SLU7	YDR088C	SCH9	P11792	824 aa	Known RBP	2.68	□□□□□ -1.98
SLU7	YDR088C	RTC2	P38279	296 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	GEP4	P38812	185 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	UTP18	P40362	594 aa	Predicted RBP	2.68	□□□□□ -1.98
SLU7	YDR088C	ATG18	P43601	500 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	SHY1	P53266	389 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	CRH1	P53301	507 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	YPR078C	Q06813	372 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	YFH1	Q07540	174 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	YDR061W	Q12298	539 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	JID1	Q12350	301 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	TFB5	Q3E7C1	72 aa	Predicted RBP	2.68	□□□□□ -1.98
SLU7	YDR088C	SRN2	Q99176	213 aa		2.68	□□□□□ -1.98
SLU7	YDR088C	PCL1	P24867	279 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	NUP2	P32499	720 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	SWI3	P32591	825 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	TIR2	P33890	251 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	ANR2	P36090	516 aa	Predicted RBP	2.67	□□□□□ -1.98
SLU7	YDR088C	OXA1	P39952	402 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	HAC1	P41546	238 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	YFR057W	P43625	151 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	YMR027W	Q04371	470 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	PRM6	Q04705	352 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	YPR091C	Q06833	770 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	NFI1	Q12216	726 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	SFG1	Q12507	346 aa		2.67	□□□□□ -1.98
SLU7	YDR088C	RPB5	P20434	215 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	PSO2	P30620	661 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	SPT10	P35208	640 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	BLI1	P35727	113 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	MAM33	P40513	266 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	TRM112	P53738	135 aa	Predicted RBP	2.66	□□□□□ -1.98
SLU7	YDR088C	EOS1	P53938	366 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	TSA2	Q04120	196 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	LOT6	Q07923	191 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	GAT3	Q07928	141 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	SKS1	Q12505	502 aa		2.66	□□□□□ -1.98
SLU7	YDR088C	RPL6B	P05739	176 aa	Known RBP	2.65	□□□□□ -1.99
SLU7	YDR088C	AAT2	P23542	418 aa	Known RBP	2.65	□□□□□ -1.99
SLU7	YDR088C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
SLU7	YDR088C	FUN26	P31381	517 aa		2.65	□□□□□ -1.99
SLU7	YDR088C	SPO23	P33757	523 aa		2.65	□□□□□ -1.99
SLU7	YDR088C	UTH1	P36135	365 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 159.9 ms