RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C COQ6P53318 479 aa1.04□□□□□ -2.24
VAM6YDL077C RNH70P53331 553 aa1.04□□□□□ -2.24
VAM6YDL077C RRN9P53437 365 aa1.04□□□□□ -2.24
VAM6YDL077C CPR8P53728 308 aa1.04□□□□□ -2.24
VAM6YDL077C SLM2P53955 656 aa1.04□□□□□ -2.24
VAM6YDL077C SMX3P54999 86 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C REG1Q00816 1014 aa1.04□□□□□ -2.24
VAM6YDL077C AAT1Q01802 451 aa1.04□□□□□ -2.24
VAM6YDL077C MRPL13Q02204 264 aa1.04□□□□□ -2.24
VAM6YDL077C YPL014WQ02606 381 aa1.04□□□□□ -2.24
VAM6YDL077C UME1Q03010 460 aa1.04□□□□□ -2.24
VAM6YDL077C UGO1Q03327 502 aa1.04□□□□□ -2.24
VAM6YDL077C BUL2Q03758 920 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C DOT1Q04089 582 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C CAC2Q04199 468 aa1.04□□□□□ -2.24
VAM6YDL077C HSP31Q04432 237 aa1.04□□□□□ -2.24
VAM6YDL077C DPB4Q04603 196 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C THI7Q05998 598 aa1.04□□□□□ -2.24
VAM6YDL077C PIN3Q06449 215 aa1.04□□□□□ -2.24
VAM6YDL077C ASA1Q06822 443 aa1.04□□□□□ -2.24
VAM6YDL077C YLL007CQ07799 665 aa1.04□□□□□ -2.24
VAM6YDL077C HRD1Q08109 551 aa1.04□□□□□ -2.24
VAM6YDL077C UAF30Q08747 228 aa1.04□□□□□ -2.24
VAM6YDL077C FLC1Q08967 793 aa1.04□□□□□ -2.24
VAM6YDL077C YPR202WQ08993 238 aa1.04□□□□□ -2.24
VAM6YDL077C YLL058WQ12198 575 aa1.04□□□□□ -2.24
VAM6YDL077C ATP14Q12349 124 aa1.04□□□□□ -2.24
VAM6YDL077C YLR118CQ12354 227 aa1.04□□□□□ -2.24
VAM6YDL077C NDJ1Q12366 352 aa1.04□□□□□ -2.24
VAM6YDL077C KCS1Q12494 1050 aa1.04□□□□□ -2.24
VAM6YDL077C YIR021W-AQ3E739 70 aa1.04□□□□□ -2.24
VAM6YDL077C SLO1Q3E784 85 aa1.04□□□□□ -2.24
VAM6YDL077C RAD61Q99359 647 aa1.04□□□□□ -2.24
VAM6YDL077C Q0144Q9ZZW2 109 aa1.04□□□□□ -2.24
VAM6YDL077C CAR1P00812 333 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C ADE4P04046 510 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C ERG20P08524 352 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C GAL2P13181 574 aa1.04□□□□□ -2.24
VAM6YDL077C TFS1P14306 219 aa1.04□□□□□ -2.24
VAM6YDL077C PDA1P16387 420 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C OM45P16547 393 aa1.04□□□□□ -2.24
VAM6YDL077C MDH1P17505 334 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
VAM6YDL077C SAR1P20606 190 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C PRE1P22141 198 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C PRP28P23394 588 aa1.04□□□□□ -2.24
VAM6YDL077C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
VAM6YDL077C BUD5P25300 642 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C VMA3P25515 160 aa1.04□□□□□ -2.24
VAM6YDL077C PBN1P25580 416 aa1.04□□□□□ -2.24
VAM6YDL077C YCR101CP25607 182 aa1.04□□□□□ -2.24
VAM6YDL077C TAH1P25638 111 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C BUB3P26449 341 aa1.04□□□□□ -2.24
VAM6YDL077C PTP2P29461 750 aa1.04□□□□□ -2.24
VAM6YDL077C SSH4P32343 579 aa1.04□□□□□ -2.24
VAM6YDL077C TCA17P32613 152 aa1.04□□□□□ -2.24
VAM6YDL077C HBS1P32769 611 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C PDC2P32896 925 aa1.04□□□□□ -2.24
VAM6YDL077C VPS17P32913 551 aa1.04□□□□□ -2.24
VAM6YDL077C DUT1P33317 147 aa1.04□□□□□ -2.24
VAM6YDL077C APL3P38065 1025 aa1.04□□□□□ -2.24
VAM6YDL077C RIB1P38066 345 aa1.04□□□□□ -2.24
VAM6YDL077C ROT2P38138 954 aa1.04□□□□□ -2.24
VAM6YDL077C GPX2P38143 162 aa1.04□□□□□ -2.24
VAM6YDL077C IST2P38250 946 aa1.04□□□□□ -2.24
VAM6YDL077C SSH1P38353 490 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C EGD2P38879 174 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C NVJ1P38881 321 aa1.04□□□□□ -2.24
VAM6YDL077C GIP4P39732 760 aa1.04□□□□□ -2.24
VAM6YDL077C MET28P40573 187 aa1.04□□□□□ -2.24
VAM6YDL077C MAD2P40958 196 aa1.04□□□□□ -2.24
VAM6YDL077C RGD2P43556 714 aa1.04□□□□□ -2.24
VAM6YDL077C GNA1P43577 159 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C CIT3P43635 486 aa1.04□□□□□ -2.24
VAM6YDL077C TOS3P43637 560 aa1.04□□□□□ -2.24
VAM6YDL077C ASG7P46993 209 aa1.04□□□□□ -2.24
VAM6YDL077C SSY5P47002 699 aa1.04□□□□□ -2.24
VAM6YDL077C MDE1P47095 244 aa1.04□□□□□ -2.24
VAM6YDL077C FAA4P47912 694 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C YGR153WP48238 217 aa1.04□□□□□ -2.24
VAM6YDL077C ASK10P48361 1146 aa1.04□□□□□ -2.24
VAM6YDL077C UPF3P48412 387 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C HSH155P49955 971 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C SPT20P50875 604 aa1.04□□□□□ -2.24
VAM6YDL077C YML6P51998 286 aa1.04□□□□□ -2.24
VAM6YDL077C COS10P52924 374 aa1.04□□□□□ -2.24
VAM6YDL077C UFD1P53044 361 aa1.04□□□□□ -2.24
VAM6YDL077C TIM21P53220 239 aa1.04□□□□□ -2.24
VAM6YDL077C SLX9P53251 210 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C SYF2P53277 215 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C ASI2P53895 289 aa1.04□□□□□ -2.24
VAM6YDL077C CDC55Q00362 526 aa1.04□□□□□ -2.24
VAM6YDL077C TIM44Q01852 431 aa1.04□□□□□ -2.24
VAM6YDL077C YPL071CQ02864 156 aa1.04□□□□□ -2.24
VAM6YDL077C SLD5Q03406 294 aa1.04□□□□□ -2.24
VAM6YDL077C PPN1Q04119 674 aa1.04□□□□□ -2.24
VAM6YDL077C CUE4Q04201 117 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C PLM2Q04383 521 aa1.04□□□□□ -2.24
VAM6YDL077C DCR2Q05924 578 aa1.04□□□□□ -2.24
VAM6YDL077C SPH1Q06160 661 aa1.04□□□□□ -2.24
VAM6YDL077C YLR455WQ06188 304 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms