RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W YHC1Q05900 231 aaKnown RBP1.47□□□□□ -2.17
HMRA1YCR097W SNT309Q06091 175 aaPredicted RBP1.47□□□□□ -2.17
HMRA1YCR097W YLR177WQ06251 628 aa1.47□□□□□ -2.17
HMRA1YCR097W BUG1Q12191 341 aa1.47□□□□□ -2.17
HMRA1YCR097W VAM3Q12241 283 aa1.47□□□□□ -2.17
HMRA1YCR097W IMA3P0CW40 589 aa1.46□□□□□ -2.18
HMRA1YCR097W IMA4P0CW41 589 aa1.46□□□□□ -2.18
HMRA1YCR097W PHO84P25297 587 aaKnown RBP1.46□□□□□ -2.18
HMRA1YCR097W TOA1P32773 286 aa1.46□□□□□ -2.18
HMRA1YCR097W RAD5P32849 1169 aaPredicted RBP1.46□□□□□ -2.18
HMRA1YCR097W ATG12P38316 186 aa1.46□□□□□ -2.18
HMRA1YCR097W LSM12P38828 187 aaKnown RBP1.46□□□□□ -2.18
HMRA1YCR097W VTA1Q06263 330 aa1.46□□□□□ -2.18
HMRA1YCR097W IMA2Q08295 589 aa1.46□□□□□ -2.18
HMRA1YCR097W MMS4P38257 691 aa1.45□□□□□ -2.18
HMRA1YCR097W NBP1P52919 319 aaPredicted RBP1.45□□□□□ -2.18
HMRA1YCR097W PRP38Q00723 242 aaPredicted RBP1.45□□□□□ -2.18
HMRA1YCR097W SRO7Q12038 1033 aa1.45□□□□□ -2.18
HMRA1YCR097W LDB17Q12342 491 aa1.45□□□□□ -2.18
HMRA1YCR097W RRN10P38204 145 aa1.44□□□□□ -2.18
HMRA1YCR097W RRT13P40042 185 aa1.44□□□□□ -2.18
HMRA1YCR097W RRP46P53256 223 aaPredicted RBP1.44□□□□□ -2.18
HMRA1YCR097W STD1Q02794 444 aa1.44□□□□□ -2.18
HMRA1YCR097W LDS2Q08218 356 aa1.44□□□□□ -2.18
HMRA1YCR097W SKG6P32900 734 aaPredicted RBP1.43□□□□□ -2.18
HMRA1YCR097W DBP7P36120 742 aaKnown RBP1.43□□□□□ -2.18
HMRA1YCR097W ECM8P38246 354 aa1.43□□□□□ -2.18
HMRA1YCR097W KEG1P43614 200 aa1.43□□□□□ -2.18
HMRA1YCR097W MKK1P32490 508 aa1.42□□□□□ -2.18
HMRA1YCR097W OTU2P38747 307 aaKnown RBP1.42□□□□□ -2.18
HMRA1YCR097W MNP1P53163 194 aaPredicted RBP1.42□□□□□ -2.18
HMRA1YCR097W RGM1Q00453 211 aa1.42□□□□□ -2.18
HMRA1YCR097W MSC3Q05812 728 aa1.42□□□□□ -2.18
HMRA1YCR097W YDR056CQ12025 205 aa1.42□□□□□ -2.18
HMRA1YCR097W CKA2P19454 339 aa1.41□□□□□ -2.18
HMRA1YCR097W ALK2P32789 676 aaPredicted RBP1.41□□□□□ -2.18
HMRA1YCR097W MMT1Q03218 510 aa1.41□□□□□ -2.18
HMRA1YCR097W ASA1Q06822 443 aa1.41□□□□□ -2.18
HMRA1YCR097W YOR376WQ08900 122 aa1.41□□□□□ -2.18
HMRA1YCR097W POM152P39685 1337 aa1.4□□□□□ -2.18
HMRA1YCR097W SSC1P0CS90 654 aaKnown RBP1.4□□□□□ -2.19
HMRA1YCR097W DBF4P32325 704 aa1.4□□□□□ -2.19
HMRA1YCR097W COS5P47187 383 aa1.4□□□□□ -2.19
HMRA1YCR097W BIO3P50277 480 aa1.4□□□□□ -2.19
HMRA1YCR097W VAC7P53950 1165 aa1.4□□□□□ -2.19
HMRA1YCR097W VTI1Q04338 217 aa1.4□□□□□ -2.19
HMRA1YCR097W RRP45Q05636 305 aaKnown RBP1.4□□□□□ -2.19
HMRA1YCR097W COS7Q07788 383 aa1.4□□□□□ -2.19
HMRA1YCR097W RPS23AP0CX29 145 aaKnown RBP1.39□□□□□ -2.19
HMRA1YCR097W RPS23BP0CX30 145 aa1.39□□□□□ -2.19
HMRA1YCR097W SNF6P18888 332 aa1.39□□□□□ -2.19
HMRA1YCR097W NIP1P32497 812 aaKnown RBP1.39□□□□□ -2.19
HMRA1YCR097W TKL2P33315 681 aa1.39□□□□□ -2.19
HMRA1YCR097W COG4Q06096 861 aa1.39□□□□□ -2.19
HMRA1YCR097W SKT5P34226 696 aa1.38□□□□□ -2.19
HMRA1YCR097W MIX17Q03667 156 aa1.38□□□□□ -2.19
HMRA1YCR097W SFM1Q12314 213 aa1.38□□□□□ -2.19
HMRA1YCR097W TRX2P22803 104 aaKnown RBP1.37□□□□□ -2.19
HMRA1YCR097W SPS19P32573 292 aaKnown RBP1.37□□□□□ -2.19
HMRA1YCR097W SHE3P38272 425 aaKnown RBP1.37□□□□□ -2.19
HMRA1YCR097W SMF1P38925 575 aa1.37□□□□□ -2.19
HMRA1YCR097W REX2P54964 269 aaKnown RBP1.37□□□□□ -2.19
HMRA1YCR097W RPA49Q01080 415 aaPredicted RBP1.37□□□□□ -2.19
HMRA1YCR097W RMI1Q02685 241 aa1.37□□□□□ -2.19
HMRA1YCR097W YAL067W-AQ8TGK6 75 aa1.37□□□□□ -2.19
HMRA1YCR097W ARG3P05150 338 aa1.36□□□□□ -2.19
HMRA1YCR097W ATP1P07251 545 aaKnown RBP1.36□□□□□ -2.19
HMRA1YCR097W RPS18AP0CX55 146 aaKnown RBP1.36□□□□□ -2.19
HMRA1YCR097W RPS18BP0CX56 146 aaPredicted RBP1.36□□□□□ -2.19
HMRA1YCR097W SPO23P33757 523 aa1.36□□□□□ -2.19
HMRA1YCR097W NTC20P38302 140 aaPredicted RBP1.36□□□□□ -2.19
HMRA1YCR097W HEM14P40012 539 aa1.36□□□□□ -2.19
HMRA1YCR097W RNH201P53942 307 aa1.36□□□□□ -2.19
HMRA1YCR097W SPR6Q01684 191 aa1.36□□□□□ -2.19
HMRA1YCR097W GRX6Q12438 231 aa1.36□□□□□ -2.19
HMRA1YCR097W PCL9Q12477 304 aa1.36□□□□□ -2.19
HMRA1YCR097W PAB1P04147 577 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19 RIP-Chip
HMRA1YCR097W SRV2P17555 526 aaKnown RBP1.35□□□□□ -2.19
HMRA1YCR097W YBR241CP38142 488 aa1.35□□□□□ -2.19
HMRA1YCR097W TRF5P48561 642 aaKnown RBP1.35□□□□□ -2.19
HMRA1YCR097W YGL138CP53122 345 aa1.35□□□□□ -2.19
HMRA1YCR097W HIF1Q12373 385 aa1.35□□□□□ -2.19
HMRA1YCR097W HMS1Q12398 434 aa1.35□□□□□ -2.19
HMRA1YCR097W ALG1P16661 449 aa1.34□□□□□ -2.19
HMRA1YCR097W RAD23P32628 398 aaKnown RBP1.34□□□□□ -2.19
HMRA1YCR097W YGL088WP53151 121 aa1.34□□□□□ -2.19
HMRA1YCR097W YGR117CP53270 476 aa1.34□□□□□ -2.19
HMRA1YCR097W YMR155WQ03795 547 aa1.34□□□□□ -2.19
HMRA1YCR097W FRE8Q12209 686 aa1.34□□□□□ -2.19
HMRA1YCR097W ADE4P04046 510 aaKnown RBP1.33□□□□□ -2.2
HMRA1YCR097W UFE1P41834 346 aa1.33□□□□□ -2.2
HMRA1YCR097W MRX11Q03079 207 aa1.33□□□□□ -2.2
HMRA1YCR097W DIS3Q08162 1001 aaKnown RBP1.33□□□□□ -2.2
HMRA1YCR097W MIG1P27705 504 aa1.32□□□□□ -2.2
HMRA1YCR097W ANP1P32629 500 aa1.32□□□□□ -2.2
HMRA1YCR097W YBL081WP38180 368 aaKnown RBP1.32□□□□□ -2.2
HMRA1YCR097W VID27P40157 782 aa1.32□□□□□ -2.2
HMRA1YCR097W CTK3P46963 296 aaPredicted RBP1.32□□□□□ -2.2
HMRA1YCR097W ASN2P49090 572 aaKnown RBP1.32□□□□□ -2.2
HMRA1YCR097W CLC1P17891 233 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 139.2 ms