RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	PET117	Q02771	107 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	BET5	Q03630	159 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	SMP3	Q04174	516 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	PLP2	Q12017	286 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	BTS1	Q12051	335 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	YPR022C	Q12139	1133 aa		4.59	□□□□□ -1.67
SMP1	YBR182C	TPK3	P05986	398 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	GDH1	P07262	454 aa	Known RBP	4.58	□□□□□ -1.68
SMP1	YBR182C	LSB5	P25369	354 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	CSM1	P25651	190 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	VMA5	P31412	392 aa	Known RBP	4.58	□□□□□ -1.68
SMP1	YBR182C	SUA5	P32579	426 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	PEX32	P38292	413 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	YHR045W	P38775	560 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	AIM10	P39965	576 aa	Known RBP	4.58	□□□□□ -1.68
SMP1	YBR182C	BTT1	P40314	149 aa	Predicted RBP	4.58	□□□□□ -1.68
SMP1	YBR182C	YJL070C	P40361	888 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	ATP23	P53722	227 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	MNT4	P53745	580 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	GIM3	P53900	129 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	AFT2	Q08957	416 aa		4.58	□□□□□ -1.68
SMP1	YBR182C	HEM2	P05373	342 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	RPS16A	P0CX51	143 aa	Known RBP	4.57	□□□□□ -1.68
SMP1	YBR182C	RPS16B	P0CX52	143 aa	Known RBP	4.57	□□□□□ -1.68
SMP1	YBR182C	SPO12	P17123	173 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	MRPL8	P22353	238 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	MXR2	P25566	168 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	RPL5	P26321	297 aa	Known RBP	4.57	□□□□□ -1.68
SMP1	YBR182C	SKG6	P32900	734 aa	Predicted RBP	4.57	□□□□□ -1.68
SMP1	YBR182C	SKT5	P34226	696 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	FRE2	P36033	711 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	HOT13	P36078	116 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	YPK3	P38070	525 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	ALD5	P40047	520 aa	Known RBP	4.57	□□□□□ -1.68
SMP1	YBR182C	FMC1	P40491	155 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	SNM1	P40993	198 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	YGR168C	P53293	376 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	IRC15	Q02733	499 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	SRL4	Q03085	281 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	BNA5	Q05979	453 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	MRPL51	Q06090	140 aa	Predicted RBP	4.57	□□□□□ -1.68
SMP1	YBR182C	THI20	Q08224	551 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	YOR338W	Q99326	363 aa		4.57	□□□□□ -1.68
SMP1	YBR182C	YCR100C	P25606	316 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	DEG1	P31115	442 aa	Known RBP	4.56	□□□□□ -1.68
SMP1	YBR182C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SMP1	YBR182C	PPZ2	P33329	710 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	SHO1	P40073	367 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	SEC9	P40357	651 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	BNA6	P43619	295 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	MRX5	P47007	382 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	MSS11	Q03825	758 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	RVB1	Q03940	463 aa	Known RBP	4.56	□□□□□ -1.68
SMP1	YBR182C	NAT4	Q04751	285 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	ECI1	Q05871	280 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	VPS74	Q06385	345 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	TSR1	Q07381	788 aa	Known RBP	4.56	□□□□□ -1.68
SMP1	YBR182C	SRL2	Q12020	392 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	YLR112W	Q12130	139 aa		4.56	□□□□□ -1.68
SMP1	YBR182C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SMP1	YBR182C	RAD7	P06779	565 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	GPI12	P23797	304 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	DAL2	P25335	343 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	PRO3	P32263	286 aa	Known RBP	4.55	□□□□□ -1.68
SMP1	YBR182C	PEX2	P32800	271 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	VAM7	P32912	316 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	PDR3	P33200	976 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	BMH2	P34730	273 aa	Known RBP	4.55	□□□□□ -1.68
SMP1	YBR182C	SPC34	P36131	295 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	YER085C	P40058	173 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	RTS2	P40962	232 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	YNR048W	P53740	393 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	YNL181W	P53878	407 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	SPR6	Q01684	191 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	ORM2	Q06144	216 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	MUM3	Q08750	479 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	SAM4	Q08985	325 aa	Known RBP	4.55	□□□□□ -1.68
SMP1	YBR182C	SLF1	Q12034	447 aa	Known RBP	4.55	□□□□□ -1.68
SMP1	YBR182C	SIA1	Q12212	622 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	YOP1	Q12402	180 aa		4.55	□□□□□ -1.68
SMP1	YBR182C	RRP12	Q12754	1228 aa	Known RBP	4.55	□□□□□ -1.68
SMP1	YBR182C	TEF1	P02994	458 aa	Known RBP	4.54	□□□□□ -1.68
SMP1	YBR182C	ARF2	P19146	181 aa	Known RBP	4.54	□□□□□ -1.68
SMP1	YBR182C	ARO4	P32449	370 aa	Known RBP	4.54	□□□□□ -1.68
SMP1	YBR182C	MRPS5	P33759	307 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	ECM15	P35195	104 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	MYO3	P36006	1272 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	IML3	P38265	245 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	MMS21	P38632	267 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	RRP3	P38712	501 aa	Known RBP	4.54	□□□□□ -1.68
SMP1	YBR182C	RTR1	P40084	226 aa	Predicted RBP	4.54	□□□□□ -1.68
SMP1	YBR182C	MSS2	P40990	351 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	COX16	P47081	118 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	YPT11	P48559	417 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	YGR117C	P53270	476 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	PGA2	P53903	129 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	IDP3	P53982	420 aa	Known RBP	4.54	□□□□□ -1.68
SMP1	YBR182C	SPP2	Q02521	185 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	ODC1	Q03028	310 aa		4.54	□□□□□ -1.68
SMP1	YBR182C	UBX2	Q04228	584 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 139.8 ms