RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 TRMT13Q9NUP7 481 aaKnown RBP10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 TMEM39AQ9NV64 488 aa10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 SETD4Q9NVD3 440 aa10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 RGL1Q9NZL6 768 aa10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 TFIP11Q9UBB9 837 aaKnown RBP10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 ATP6V1DQ9Y5K8 247 aa10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 CLIC4Q9Y696 253 aa10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
TUBBP8-201ENST00000560273 VWA3AA6NCI4 1184 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 POTEMA6NI47 508 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 RRN3P2A6NIE6 340 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 SLITRK3O94933 977 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 CD4P01730 458 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 OATP04181 439 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 ATP4AP20648 1035 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 IGBP1P78318 339 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 PRKCEQ02156 737 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 CYP4A11Q02928 519 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 FAAP100Q0VG06 881 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 CTTNQ14247 550 aaKnown RBP10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 STK38Q15208 465 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 GRIK4Q16099 956 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 IL17AQ16552 155 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 UGCGQ16739 394 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 XKR3Q5GH77 459 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 ZNF484Q5JVG2 852 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 KRT79Q5XKE5 535 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 ATL3Q6DD88 541 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 DYDC2Q96IM9 177 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 HSD17B14Q9BPX1 270 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 FTOQ9C0B1 505 aaKnown RBP eCLIP10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 ZSWIM4Q9H7M6 989 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 CFAP45Q9UL16 551 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 IGSF9BQ9UPX0 1349 aa10.57□□□□□ -0.72
TUBBP8-201ENST00000560273 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 ZNF862O60290 1169 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 CYP2C9P11712 490 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 NASPP49321 788 aaPredicted RBP10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 ZNF200P98182 395 aaPredicted RBP10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 PTPAQ15257 358 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 HAUS3Q68CZ6 603 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 C4orf19Q8IY42 314 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 IGSF22Q8N9C0 903 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 LMBR1Q8WVP7 490 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 LXNQ9BS40 222 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 TUFT1Q9NNX1 390 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 PDLIM7Q9NR12 457 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 KIAA1217Q5T5P2 1943 aa10.56□□□□□ -0.72
TUBBP8-201ENST00000560273 MYH7BA7E2Y1 1941 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 KIAA0355O15063 1070 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 TREHO43280 583 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 RAG1P15918 1043 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 NCLP19338 710 aaKnown RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 RPA1P27694 616 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 MARCKSP29966 332 aaPredicted RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 HOXC8P31273 242 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 YWHABP31946 246 aaKnown RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 DDIT3P35638 169 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 LONP1P36776 959 aaKnown RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 CCT6AP40227 531 aaKnown RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 DNM1Q05193 864 aaKnown RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 PTK7Q13308 1070 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 BFSP2Q13515 415 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 HIC1Q14526 733 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 CATSPER3Q86XQ3 398 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 RETREG2Q8NC44 543 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 LINC00301Q8NCQ3 95 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 SNX29Q8TEQ0 813 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 AK8Q96MA6 479 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 POLR3CQ9BUI4 534 aaPredicted RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 NIFKQ9BYG3 293 aaKnown RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 TUBE1Q9UJT0 475 aa10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 ZMYND8Q9ULU4 1186 aaPredicted RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 SRPRBQ9Y5M8 271 aaKnown RBP10.55□□□□□ -0.72
TUBBP8-201ENST00000560273 COL1A2P08123 1366 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 TRIM43BA6NCK2 446 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 PP2D1A8MPX8 630 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 SPTLC2O15270 562 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 MAGEB2O15479 319 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 PPP6R2O75170 966 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 MED24O75448 989 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 STBD1O95210 358 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 LYPLA2O95372 231 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 YEATS4O95619 227 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 SPATA31C1P0DKV0 1188 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 XRCC6P12956 609 aaKnown RBP eCLIP10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 SYN1P17600 705 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 MUTP22033 750 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 KLRC1P26715 233 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 CDC25AP30304 524 aa10.54□□□□□ -0.72
TUBBP8-201ENST00000560273 UBA7P41226 1012 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms