RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PDCD2LQ9BRP1 358 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 INSL6Q9Y581 213 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 MYH6P13533 1939 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.04□□□□□ -0.8
VRK1-206ENST00000557222 LINC01553A4QN01 128 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
VRK1-206ENST00000557222 OPLAHO14841 1288 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 STAM2O75886 525 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
VRK1-206ENST00000557222 HOXC8P31273 242 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 CHMP4BP1P59074 171 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 DEFB103AP81534 67 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 HTRA4P83105 476 aaPredicted RBP10.04□□□□□ -0.8
VRK1-206ENST00000557222 SEC23AQ15436 765 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 C6orf118Q5T5N4 469 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 ZNF618Q5T7W0 954 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 SERINC5Q86VE9 423 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 PPP1R13LQ8WUF5 828 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 FAM122AQ96E09 287 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 SUGCTQ9HAC7 445 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 MAD2L2Q9UI95 211 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 PCDHA1Q9Y5I3 950 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 LAMA4Q16363 1823 aa10.04□□□□□ -0.8
VRK1-206ENST00000557222 LCHNA4D1U4 455 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 RSPH10B2B2RC85 870 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 GCOM1H8Y6P7 765 aaPredicted RBP10.03□□□□□ -0.8
VRK1-206ENST00000557222 GPR37L1O60883 481 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 AMHP03971 560 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 RSPH10BP0C881 870 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 POLR2MP0CAP2 368 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 GNAT1P11488 350 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 CCND2P30279 289 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 ICAM3P32942 547 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 PGM5Q15124 567 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 HSDL1Q3SXM5 330 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 INTS6LQ5JSJ4 861 aaKnown RBP10.03□□□□□ -0.8
VRK1-206ENST00000557222 KRT40Q6A162 431 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 BANK1Q8NDB2 785 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 NECAB3Q96P71 396 aaPredicted RBP10.03□□□□□ -0.8
VRK1-206ENST00000557222 C16orf70Q9BSU1 422 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 USP26Q9BXU7 913 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 RIOX1Q9H6W3 641 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 MYH7BA7E2Y1 1941 aa10.03□□□□□ -0.8
VRK1-206ENST00000557222 PTPRSQ13332 1948 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 PNMA6FA0A0J9YX94 578 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 C17orf102A2RUQ5 167 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 H3BRB1 525 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 PPP1R11O60927 126 aaPredicted RBP10.02□□□□□ -0.81
VRK1-206ENST00000557222 UPP2O95045 317 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 GGPS1O95749 300 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 ZNF286BP0CG31 522 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 MYCLP12524 364 aaPredicted RBP10.02□□□□□ -0.81
VRK1-206ENST00000557222 BMP2P12643 396 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 UBA1P22314 1058 aaKnown RBP10.02□□□□□ -0.81
VRK1-206ENST00000557222 TRDNQ13061 729 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 NEDD9Q14511 834 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 PTPROQ16827 1216 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 GNPTABQ3T906 1256 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 LEXMQ3ZCV2 418 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 TMEM31Q5JXX7 168 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 XRRA1Q6P2D8 792 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 TUT1Q9H6E5 874 aaKnown RBP10.02□□□□□ -0.81
VRK1-206ENST00000557222 UBE2ZQ9H832 354 aaPredicted RBP10.02□□□□□ -0.81
VRK1-206ENST00000557222 MLXIPQ9HAP2 919 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 NXF1Q9UBU9 619 aaKnown RBP10.02□□□□□ -0.81
VRK1-206ENST00000557222 FRMPD4Q14CM0 1322 aa10.02□□□□□ -0.81
VRK1-206ENST00000557222 MUC6Q6W4X9 2439 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 SOBPA7XYQ1 873 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 PI4K2BG5E9Z4 385 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 THPOP40225 353 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
VRK1-206ENST00000557222 SP2Q02086 613 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 DHX9Q08211 1270 aaKnown RBP10.01□□□□□ -0.81
VRK1-206ENST00000557222 GRM4Q14833 912 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 TCTN1Q2MV58 587 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 LCE2CQ5TA81 110 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 B4GALNT3Q6L9W6 998 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 METTL7BQ6UX53 244 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 DBF4BQ8NFT6 615 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 GDPD5Q8WTR4 605 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 SEPT8Q92599 483 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 APBB2Q92870 758 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 ATP6V0A1Q93050 837 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 WNT8BQ93098 351 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 TOP1MTQ969P6 601 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 MRPL38Q96DV4 380 aaKnown RBP10.01□□□□□ -0.81
VRK1-206ENST00000557222 INPP4AQ96PE3 977 aaPredicted RBP10.01□□□□□ -0.81
VRK1-206ENST00000557222 MAP3K14Q99558 947 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 SENP7Q9BQF6 1050 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 LRFN3Q9BTN0 628 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 EPHX3Q9H6B9 360 aa10.01□□□□□ -0.81
VRK1-206ENST00000557222 HCN4Q9Y3Q4 1203 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms