RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 VCPKMTQ9H867 229 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 SH3GLB2Q9NR46 395 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 CEP131Q9UPN4 1083 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 FRMD3A2A2Y4 597 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 A6NCN8 305 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 LRRC72A6NJI9 287 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 YDJCA8MPS7 323 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
TCF4-207ENST00000540999 TEX28O15482 410 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 ZBTB43O43298 467 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 STAMBPO95630 424 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 PNMA6AP0CW24 399 aaPredicted RBP9.67□□□□□ -0.86
TCF4-207ENST00000540999 CD9P21926 228 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 OXCT1P55809 520 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 SEC23AQ15436 765 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 C12orf60Q5U649 245 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 DGLUCYQ7Z3D6 616 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 SGMS1Q86VZ5 419 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 GRAMD2AQ8IUY3 354 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 TTLL6Q8N841 843 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 LMBR1Q8WVP7 490 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 ESR2Q92731 530 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 ARHGEF2Q92974 986 aaKnown RBP9.67□□□□□ -0.86
TCF4-207ENST00000540999 MAELQ96JY0 434 aaKnown RBP9.67□□□□□ -0.86
TCF4-207ENST00000540999 C8orf76Q96K31 380 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 SERINC2Q96SA4 455 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 EYA3Q99504 573 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
TCF4-207ENST00000540999 UBAC1Q9BSL1 405 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 ZSWIM4Q9H7M6 989 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 PCDH18Q9HCL0 1135 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.67□□□□□ -0.86
TCF4-207ENST00000540999 TRIM17Q9Y577 477 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 SLC12A7Q9Y666 1083 aa9.67□□□□□ -0.86
TCF4-207ENST00000540999 BZW2Q9Y6E2 419 aaKnown RBP9.67□□□□□ -0.86
TCF4-207ENST00000540999 GAKO14976 1311 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 CCDC69A6NI79 296 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 H3BQV1 296 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 KLHL41O60662 606 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 RPS6KA5O75582 802 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 GFPT2O94808 682 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 FGRP09769 529 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 SKIP12755 728 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 CACNB3P54284 484 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 PHEXP78562 749 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 CDK17Q00537 523 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 INAQ16352 499 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 RTL10Q7L3V2 364 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 GALNT6Q8NCL4 622 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 CLMNQ96JQ2 1002 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 ZNF277Q9NRM2 450 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 ARPP21Q9UBL0 812 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 PCDHGB3Q9Y5G1 929 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 NAV1Q8NEY1 1877 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 FLT1P17948 1338 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 COL4A5P29400 1685 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 IQCA1LA6NCM1 817 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 TTC34A8MYJ7 566 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 PPIP5K2O43314 1243 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 KPNA6O60684 536 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 NCAM1P13591 858 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 ATF7P17544 494 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 PDCP20941 246 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 UBA7P41226 1012 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 LIFRP42702 1097 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 CBX3Q13185 183 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 SP140Q13342 867 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 SBK1Q52WX2 424 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 PODNQ7Z5L7 613 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 ZBTB8BQ8NAP8 495 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 RASSF8Q8NHQ8 419 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 MAML1Q92585 1016 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 ZSCAN10Q96SZ4 725 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 ALG1Q9BT22 464 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 DDX4Q9NQI0 724 aaKnown RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 BATF3Q9NR55 127 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 NDFIP2Q9NV92 336 aa9.66□□□□□ -0.86
TCF4-207ENST00000540999 SCHIP1Q9P0W5 487 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
TCF4-207ENST00000540999 MYH1P12882 1939 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 POLR3GO15318 223 aaPredicted RBP9.65□□□□□ -0.86
TCF4-207ENST00000540999 DIAPH2O60879 1101 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 KATNA1O75449 491 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 POLR3DP05423 398 aaPredicted RBP9.65□□□□□ -0.86
TCF4-207ENST00000540999 HOXD12P35452 270 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 ZNF445P59923 1031 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 CUL3Q13618 768 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 NTRK3Q16288 839 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 PKN2Q16513 984 aaKnown RBP9.65□□□□□ -0.86
TCF4-207ENST00000540999 DACT2Q5SW24 774 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 ADALQ6DHV7 355 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 EPS8L3Q8TE67 593 aaKnown RBP9.65□□□□□ -0.86
TCF4-207ENST00000540999 ATP6V0A1Q93050 837 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.86
TCF4-207ENST00000540999 PIH1D1Q9NWS0 290 aaKnown RBP9.65□□□□□ -0.86
TCF4-207ENST00000540999 DLEC1Q9Y238 1755 aa9.65□□□□□ -0.86
TCF4-207ENST00000540999 ZNF646O15015 1829 aaPredicted RBP9.65□□□□□ -0.86
TCF4-207ENST00000540999 ERICH2A1L162 156 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms