RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 EDIL3O43854 480 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 CCNT1O60563 726 aaKnown RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 DKC1O60832 514 aaKnown RBP eCLIP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 PSMD10O75832 226 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 CD2BP2O95400 341 aaKnown RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 BAG4O95429 457 aaKnown RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 TDP2O95551 362 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 SMIM10L2AP0DMW4 78 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 SMIM10L2BP0DMW5 78 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 PDCP20941 246 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 FECHP22830 423 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 U2AF2P26368 475 aaKnown RBP eCLIP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 STAT5BP51692 787 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 NR5A1Q13285 461 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 PPP2R5CQ13362 524 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 GNL2Q13823 731 aaKnown RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 GDF6Q6KF10 455 aaPredicted RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 ABHD15Q6UXT9 468 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 SH3RF1Q7Z6J0 888 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 RPAINQ86UA6 219 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 SERINC5Q86VE9 423 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 NOSTRINQ8IVI9 506 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 BADQ92934 168 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 SNX21Q969T3 373 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 FAM167AQ96KS9 214 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 TRPV6Q9H1D0 765 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 MTIF3Q9H2K0 278 aaKnown RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 ZNF302Q9NR11 478 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 GJB4Q9NTQ9 266 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 NOL7Q9UMY1 257 aaKnown RBP9.24□□□□□ -0.93
NEDD4-210ENST00000513957 CEP131Q9UPN4 1083 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 SMC3Q9UQE7 1217 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 EVPLQ92817 2033 aa9.24□□□□□ -0.93
NEDD4-210ENST00000513957 RANBP2P49792 3224 aaKnown RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 MICAL3Q7RTP6 2002 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 MBLAC1A4D2B0 266 aaPredicted RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 K7ELQ4 463 aaPredicted RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 BACH1O14867 736 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 HBP1O60381 514 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 SORBS3O60504 671 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 NEMFO60524 1076 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 CCNE2O96020 404 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 ADAM17P78536 824 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 MDM2Q00987 491 aaPredicted RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 PPFIA1Q13136 1202 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 DSG2Q14126 1118 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 LRIT3Q3SXY7 679 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 UTP14CQ5TAP6 766 aaKnown RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 B3GNT9Q6UX72 402 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 RSPH3Q86UC2 560 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 TRIM50Q86XT4 487 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 ZNF710Q8N1W2 664 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 ATP8B4Q8TF62 1192 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 ATP6V0A1Q93050 837 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 KIF12Q96FN5 646 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 CALR3Q96L12 384 aaKnown RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 PCYT2Q99447 389 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 TMUB1Q9BVT8 246 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 RNPEPQ9H4A4 650 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 BCAS3Q9H6U6 928 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 COLQQ9Y215 455 aaPredicted RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 USTQ9Y2C2 406 aa9.23□□□□□ -0.93
NEDD4-210ENST00000513957 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
NEDD4-210ENST00000513957 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 DDX39AO00148 427 aaKnown RBP9.22□□□□□ -0.93
NEDD4-210ENST00000513957 LAD1O00515 517 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 SLC37A4O43826 429 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 IQCF3P0C7M6 154 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 SELPP16109 830 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 CDK11BP21127 795 aaKnown RBP9.22□□□□□ -0.93
NEDD4-210ENST00000513957 ITGB8P26012 769 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 GJB2P29033 226 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 GRIK4Q16099 956 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 CALCRLQ16602 461 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 RILPL1Q5EBL4 403 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 HABP4Q5JVS0 413 aaKnown RBP9.22□□□□□ -0.93
NEDD4-210ENST00000513957 GPR153Q6NV75 609 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 PDXDC2PQ6P474 469 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 LRRC8DQ7L1W4 858 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 CCDC60Q8IWA6 550 aaPredicted RBP9.22□□□□□ -0.93
NEDD4-210ENST00000513957 NEK9Q8TD19 979 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 LMBR1Q8WVP7 490 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 CTAGE1Q96RT6 745 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 REPIN1Q9BWE0 567 aaKnown RBP9.22□□□□□ -0.93
NEDD4-210ENST00000513957 PPP1R12CQ9BZL4 782 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 IL23AQ9NPF7 189 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 DISC1Q9NRI5 854 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 TUBE1Q9UJT0 475 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 TRPC6Q9Y210 931 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 SAMM50Q9Y512 469 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 PPME1Q9Y570 386 aa9.22□□□□□ -0.93
NEDD4-210ENST00000513957 GBF1Q92538 1859 aa9.21□□□□□ -0.93
NEDD4-210ENST00000513957 LAMA3Q16787 3333 aa9.21□□□□□ -0.93
NEDD4-210ENST00000513957 SMIM35A0A1B0GVV1 85 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 H3BQV1 296 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 MAGEB2O15479 319 aa9.21□□□□□ -0.94
NEDD4-210ENST00000513957 MARCH6O60337 910 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms