RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 CUL1Q13616 776 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 C15orf52Q6ZUT6 534 aaKnown RBP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 CSGALNACT2Q8N6G5 542 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 ANKRD13CQ8N6S4 541 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 XPO6Q96QU8 1125 aaKnown RBP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 DDX4Q9NQI0 724 aaKnown RBP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 PANK4Q9NVE7 773 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 SWAP70Q9UH65 585 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 FLT1P17948 1338 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 H0YIN7 160 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 BUB1O43683 1085 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 AHCYL1O43865 530 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 AKR1B10O60218 316 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 RHOBTB3O94955 611 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 CLTAP09496 248 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 CDC25CP30307 473 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 PPP4CP60510 307 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 TCP10Q12799 353 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 SBK1Q52WX2 424 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 NAALADL2Q58DX5 795 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 PIGWQ7Z7B1 504 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 ZFPM1Q8IX07 1006 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 ITFG2Q969R8 447 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 TLCD1Q96CP7 247 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 DHTKD1Q96HY7 919 aaPredicted RBP11.13□□□□□ -0.63
LINC01287-201ENST00000416982 CAMKK2Q96RR4 588 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
LINC01287-201ENST00000416982 ASAP2O43150 1006 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 XBP1P17861 261 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 PRPHP41219 470 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 SLC1A4P43007 532 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 CDK8P49336 464 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 MAGOHP61326 146 aaKnown RBP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 TNNC1P63316 161 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 NFIAQ12857 509 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 SEMA3FQ13275 785 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 USP38Q8NB14 1042 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 PNMA1Q8ND90 353 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 MAGOHBQ96A72 148 aaKnown RBP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 NOC4LQ9BVI4 516 aaKnown RBP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 NEUROG2Q9H2A3 272 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 CNOT10Q9H9A5 744 aaKnown RBP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 MYH1P12882 1939 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 DIAPH2O60879 1101 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 RASA1P20936 1047 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 ABL2P42684 1182 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 RBM5P52756 815 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 RASSF7Q02833 373 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 AOC3Q16853 763 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 SLC5A9Q2M3M2 681 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 ODF2Q5BJF6 829 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 MEI1Q5TIA1 1274 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 TBC1D1Q86TI0 1168 aaPredicted RBP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 PNMA8AQ86V59 439 aaPredicted RBP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 FAM114A1Q8IWE2 563 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 ANKRD13AQ8IZ07 590 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 COA1Q9GZY4 146 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 VAT1LQ9HCJ6 419 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 FBXL5Q9UKA1 691 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC01287-201ENST00000416982 AGAP1Q9UPQ3 857 aa11.12□□□□□ -0.63
LINC01287-201ENST00000416982 CCNE1P24864 410 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 STAT6P42226 847 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 SSR1P43307 286 aaKnown RBP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 BAP1Q92560 729 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 P2RX5Q93086 422 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 PRPF3O43395 683 aaKnown RBP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 PALMO75781 387 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 NQO1P15559 274 aaKnown RBP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 CCND1P24385 295 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 CCNG1P51959 295 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 GFPT1Q06210 699 aaPredicted RBP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 THEMIS2Q5TEJ8 643 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 ANKRD40Q6AI12 368 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 TMTC3Q6ZXV5 915 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 ANKS4BQ8N8V4 417 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 FLAD1Q8NFF5 587 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 RASGRP4Q8TDF6 673 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 YIPF3Q9GZM5 350 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 LRRC4CQ9HCJ2 640 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 DISC1Q9NRI5 854 aa11.11□□□□□ -0.63
LINC01287-201ENST00000416982 CPSF2Q9P2I0 782 aaKnown RBP11.11□□□□□ -0.63
LINC01287-201ENST00000416982 PCDHGC5Q9Y5F6 944 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms