RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Epb41l4aP52963 686 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Ly9Q01965 654 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Cln3Q61124 438 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Btnl9Q8BJE2 536 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Enox2Q8R0Z2 598 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Rpap2Q8VC34 614 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Znhit2Q9QY66 399 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tanc1Q0VGY8 1856 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Gm4907B1AXB9 411 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Cops5O35864 334 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 GmnnO88513 206 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 PklrP53657 574 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Fam20aQ8CID3 541 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Snap47Q8R570 413 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Psmd2Q8VDM4 908 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Q9D5Q8 446 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Myl7Q9QVP4 175 aa25.24■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Apol10bG3X9K7 334 aa25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Trdmt1O55055 415 aa25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Mov10P23249 1004 aaKnown RBP25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 H2afxP27661 143 aaKnown RBP25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Kif2aP28740 705 aa25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Gja3Q64448 417 aa25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Rtp1Q8C8C1 263 aa25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Znf445Q8R2V3 986 aa25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Mis18aQ9CZJ6 204 aa25.23■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Ace3D0G895 737 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Myo1aO88329 1043 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Rsad1Q5SUV1 442 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Ppp1r13bQ62415 1087 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Cdc14aQ6GQT0 603 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Spag5Q7TME2 1165 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Sestd1Q80UK0 696 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 GlmnQ8BZM1 596 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Rasal3Q8C2K5 1041 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Znf687Q9D2D7 1237 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Arhgef7Q9ES28 862 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Arhgef10lA2AWP8 1280 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Cfap52Q5F201 620 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Cacna2d4Q5RJF7 1116 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Exoc3Q6KAR6 755 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tmem63cQ8CBX0 802 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Nudt5Q9JKX6 218 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Limd1Q9QXD8 668 aa25.22■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Trim5E9PV98 497 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Vmn2r79E9Q067 851 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 GpiP06745 558 aaKnown RBP25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Fgfr4Q03142 799 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 SobpQ0P5V2 864 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Etf1Q8BWY3 437 aaKnown RBP25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Klhl30Q8C3F7 581 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Frat2Q8K025 231 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Tex21Q9R0U9 575 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Gm45194A0A140LJG2 572 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Timm44O35857 452 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Pgk2P09041 417 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Samsn1P57725 372 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Nploc4P60670 608 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Lrrc55Q3UY51 311 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 L1td1Q587J6 782 aaKnown RBP25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Mei4Q8BRM6 389 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Fam53cQ8BXQ8 393 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Sucla2Q9Z2I9 463 aa25.21■■□□□ 1.63
Upf3a-201ENSMUST00000043767 Scgb2b18A0A087WPA9 112 aa25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Ttll6A4Q9E8 822 aa25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 PrkceP16054 737 aa25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Ric8aQ3TIR3 530 aa25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Srd5a1Q68FF9 255 aa25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Ddx27Q921N6 760 aaKnown RBP25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Cfap45Q9D9U9 551 aa25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Itga2bQ9QUM0 1033 aa25.2■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Lamb2Q61292 1799 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Skint7A7XV04 395 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Pstpip1P97814 415 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 NfiaQ02780 532 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Slc9a2Q3ZAS0 814 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Rbm41Q8JZV4 413 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Tgs1Q923W1 853 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Ep400Q8CHI8 3072 aaKnown RBP25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Prpmp5E9PXN1 296 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Cd70O55237 195 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Nmt1O70310 496 aaKnown RBP25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Pou3f3P31361 497 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 VegfbP49766 207 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 StamP70297 548 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Mcm7Q61881 719 aaKnown RBP25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Smarca1Q6PGB8 1046 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 EtnpplQ8BWU8 499 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Zcchc18Q8VD24 393 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Sorbs3Q9R1Z8 733 aa25.19■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Gm5934D3Z4U6 212 aa25.18■■□□□ 1.62
Upf3a-201ENSMUST00000043767 P4hbP09103 509 aaKnown RBP25.18■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Ipo5Q8BKC5 1097 aaKnown RBP25.18■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Slc6a16A0A1L1SR47 742 aa25.17■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Ddr2Q62371 854 aa25.17■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Cdkn2aipQ8BI72 563 aa25.17■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Mtmr6Q8VE11 617 aa25.17■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Slc14a1Q8VHL0 384 aa25.17■■□□□ 1.62
Upf3a-201ENSMUST00000043767 Prpf6Q91YR7 941 aaKnown RBP25.17■■□□□ 1.62
Upf3a-201ENSMUST00000043767 IydQ9DCX8 285 aa25.17■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms