Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm25239-201ENSMUST00000174915 86 ntBASIC46.21■■■■■ 4.99
Rtp1Q8C8C1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.05■■■■■ 4.48
Rtp1Q8C8C1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.35■■■■■ 4.37
Rtp1Q8C8C1 Gm24109-201ENSMUST00000175489 103 ntBASIC40.4■■■■■ 4.06
Rtp1Q8C8C1 Gm15042-201ENSMUST00000120212 883 ntBASIC39.73■■■■□ 3.95
Rtp1Q8C8C1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.04■■■■□ 3.84
Rtp1Q8C8C1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
Rtp1Q8C8C1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Rtp1Q8C8C1 Gm15045-201ENSMUST00000117359 883 ntBASIC38.73■■■■□ 3.79
Rtp1Q8C8C1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Rtp1Q8C8C1 Gm23366-201ENSMUST00000175022 89 ntBASIC38.48■■■■□ 3.75
Rtp1Q8C8C1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.91■■■■□ 3.66
Rtp1Q8C8C1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.57■■■■□ 3.6
Rtp1Q8C8C1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
Rtp1Q8C8C1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Rtp1Q8C8C1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.48■■■■□ 3.59
Rtp1Q8C8C1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
Rtp1Q8C8C1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rtp1Q8C8C1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Rtp1Q8C8C1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.8■■■■□ 3.48
Rtp1Q8C8C1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.73■■■■□ 3.47
Rtp1Q8C8C1 Gm25238-201ENSMUST00000174914 89 ntBASIC36.69■■■■□ 3.46
Rtp1Q8C8C1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Rtp1Q8C8C1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Rtp1Q8C8C1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.31■■■■□ 3.4
Rtp1Q8C8C1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.91■■■■□ 3.34
Rtp1Q8C8C1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
Rtp1Q8C8C1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.81■■■■□ 3.32
Rtp1Q8C8C1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
Rtp1Q8C8C1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Rtp1Q8C8C1 Gm25262-201ENSMUST00000174934 133 ntBASIC35.47■■■■□ 3.27
Rtp1Q8C8C1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.39■■■■□ 3.26
Rtp1Q8C8C1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Rtp1Q8C8C1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.33■■■■□ 3.25
Rtp1Q8C8C1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.2■■■■□ 3.23
Rtp1Q8C8C1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Rtp1Q8C8C1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.08■■■■□ 3.21
Rtp1Q8C8C1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rtp1Q8C8C1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.98■■■■□ 3.19
Rtp1Q8C8C1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
Rtp1Q8C8C1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.96■■■■□ 3.19
Rtp1Q8C8C1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.91■■■■□ 3.18
Rtp1Q8C8C1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.91■■■■□ 3.18
Rtp1Q8C8C1 Gm26115-201ENSMUST00000175605 87 ntBASIC34.86■■■■□ 3.17
Rtp1Q8C8C1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
Rtp1Q8C8C1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rtp1Q8C8C1 Psd-208ENSMUST00000224556 2034 ntBASIC34.7■■■■□ 3.15
Rtp1Q8C8C1 Gm27325-201ENSMUST00000175467 74 ntBASIC34.69■■■■□ 3.14
Rtp1Q8C8C1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.68■■■■□ 3.14
Rtp1Q8C8C1 Gm8109-201ENSMUST00000194076 746 ntBASIC34.6■■■■□ 3.13
Rtp1Q8C8C1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Rtp1Q8C8C1 Rab21-202ENSMUST00000218831 843 ntBASIC34.49■■■■□ 3.11
Rtp1Q8C8C1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.49■■■■□ 3.11
Rtp1Q8C8C1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Rtp1Q8C8C1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Rtp1Q8C8C1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rtp1Q8C8C1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Rtp1Q8C8C1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Rtp1Q8C8C1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Rtp1Q8C8C1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Rtp1Q8C8C1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.07■■■■□ 3.04
Rtp1Q8C8C1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
Rtp1Q8C8C1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.91■■■■□ 3.02
Rtp1Q8C8C1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Rtp1Q8C8C1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.78■■■■□ 3
Rtp1Q8C8C1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Rtp1Q8C8C1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.75■■■□□ 2.99
Rtp1Q8C8C1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.73■■■□□ 2.99
Rtp1Q8C8C1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Rtp1Q8C8C1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.6■■■□□ 2.97
Rtp1Q8C8C1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Rtp1Q8C8C1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Rtp1Q8C8C1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Rtp1Q8C8C1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Rtp1Q8C8C1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
Rtp1Q8C8C1 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.44■■■□□ 2.94
Rtp1Q8C8C1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rtp1Q8C8C1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.41■■■□□ 2.94
Rtp1Q8C8C1 Gm24804-201ENSMUST00000174982 85 ntBASIC33.39■■■□□ 2.94
Rtp1Q8C8C1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Rtp1Q8C8C1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Rtp1Q8C8C1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rtp1Q8C8C1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rtp1Q8C8C1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
Rtp1Q8C8C1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.09■■■□□ 2.89
Rtp1Q8C8C1 Gm27322-201ENSMUST00000184007 104 ntBASIC33.06■■■□□ 2.88
Rtp1Q8C8C1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.03■■■□□ 2.88
Rtp1Q8C8C1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rtp1Q8C8C1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33■■■□□ 2.87
Rtp1Q8C8C1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.99■■■□□ 2.87
Rtp1Q8C8C1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.98■■■□□ 2.87
Rtp1Q8C8C1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.97■■■□□ 2.87
Rtp1Q8C8C1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.92■■■□□ 2.86
Rtp1Q8C8C1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
Rtp1Q8C8C1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
Rtp1Q8C8C1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.87■■■□□ 2.85
Rtp1Q8C8C1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.87■■■□□ 2.85
Rtp1Q8C8C1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Rtp1Q8C8C1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rtp1Q8C8C1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms