RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm11549A0A286YD83 63 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ugt1a5B2RT14 529 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Inpp1P49442 396 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Arhgef9Q3UTH8 516 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Armcx2Q6A058 784 aaKnown RBP9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Apol9bQ8C7I4 310 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Dclre1bQ8C7W7 541 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ints9Q8K114 658 aaKnown RBP9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Apol9aQ8VDU3 310 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Dach2Q925Q8 634 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Snx2Q9CWK8 519 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rabgef1Q9JM13 491 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gfpt2Q9Z2Z9 682 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mcl1P97287 331 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ect2Q07139 913 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm5592Q3V0A6 857 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ece1Q4PZA2 769 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 LnpkQ7TQ95 425 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 LRWD1Q8BUI3 648 aaKnown RBP9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 P3h2Q8CG71 703 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mtss1Q8R1S4 759 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 BaatQ91X34 420 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tlr3Q99MB1 905 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tekt1Q9DAJ2 418 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rtl9Q32KG4 1339 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Qtrt2B8ZXI1 415 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Acad12D3Z7X0 555 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 DgkkE9Q7N4 1118 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm8879F6R3J9 157 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Speer4eK7N6S8 255 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ets1P27577 440 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Abce1P61222 599 aaKnown RBP9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ccdc185Q3V118 621 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Creb3Q61817 404 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Nlrp4eQ66X19 978 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Fhod1Q6P9Q4 1197 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Otub1Q7TQI3 271 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 F13a1Q8BH61 732 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pnpt1Q8K1R3 783 aaKnown RBP9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gdf11Q9Z1W4 405 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cdc27A2A6Q5 825 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Zfp212G3X8R7 492 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Lrch1P62046 709 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 1700013D24RikQ0P521 120 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Dab2ipQ3UHC7 1189 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Znf148Q61624 794 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 GypcQ78HU7 95 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rnf14Q9JI90 485 aa9.8□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Col1a2Q01149 1372 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cdh2P15116 906 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Hspa2P17156 633 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Dpcr1Q3TNW5 500 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Meis1Q60954 390 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mrpl47Q8K2Y7 252 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Nol6Q8R5K4 1152 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Satb2Q8VI24 733 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 HnmtQ91VF2 295 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Setd6Q9CWY3 473 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Fthl17aQ9DAX0 182 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Eif4enif1Q9EST3 983 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Clcn6O35454 870 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Prl3b1P09586 222 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Hoxb8P09632 243 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 GabrdP22933 449 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 VdrP48281 422 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cops2P61202 443 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Thumpd3P97770 505 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Nsun7Q14AW5 724 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Sfi1Q3UZY0 1216 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Usp28Q5I043 1051 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Acbd5Q5XG73 508 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ppp2r2aQ6P1F6 447 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Nxf7Q80SZ6 620 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Skida1Q80YR3 822 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Usp44Q8C2S0 711 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 StrbpQ91WM1 672 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Wbp11Q923D5 641 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mccc1Q99MR8 717 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ranbp17Q99NF8 1088 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Trim12aQ99PQ1 284 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Dnajc12Q9R022 198 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tk2Q9R088 270 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Myo1cQ9WTI7 1063 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Synj2Q9D2G5 1434 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Prex2Q3LAC4 1598 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gjb6P70689 261 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Acap3Q6NXL5 833 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Kiaa0391Q8JZY4 584 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rnf112Q96DY5 654 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pls3Q99K51 630 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ddah1Q9CWS0 285 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 CoasyQ9DBL7 563 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Disp1Q3TDN0 1521 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Nos1Q9Z0J4 1429 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cdk13Q69ZA1 1511 aaKnown RBP9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Apol6B7ZC55 329 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 1700122O11RikJ3QPW6 241 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Psma3O70435 255 aa9.79□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Kcnma1Q08460 1209 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms