Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Gm25239-201ENSMUST00000174915 86 ntBASIC40.1■■■■■ 4.01
Rtl9Q32KG4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Rtl9Q32KG4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Rtl9Q32KG4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Rtl9Q32KG4 Gm15042-201ENSMUST00000120212 883 ntBASIC35.03■■■■□ 3.2
Rtl9Q32KG4 Gm24109-201ENSMUST00000175489 103 ntBASIC34.77■■■■□ 3.16
Rtl9Q32KG4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Rtl9Q32KG4 Gm15045-201ENSMUST00000117359 883 ntBASIC34.24■■■■□ 3.07
Rtl9Q32KG4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.11■■■■□ 3.05
Rtl9Q32KG4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Rtl9Q32KG4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Rtl9Q32KG4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Rtl9Q32KG4 Gm23366-201ENSMUST00000175022 89 ntBASIC33.49■■■□□ 2.95
Rtl9Q32KG4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Rtl9Q32KG4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rtl9Q32KG4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.75■■■□□ 2.83
Rtl9Q32KG4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Rtl9Q32KG4 Psd-208ENSMUST00000224556 2034 ntBASIC32.56■■■□□ 2.8
Rtl9Q32KG4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Rtl9Q32KG4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rtl9Q32KG4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.41■■■□□ 2.78
Rtl9Q32KG4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rtl9Q32KG4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Rtl9Q32KG4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Rtl9Q32KG4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.21■■■□□ 2.75
Rtl9Q32KG4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Rtl9Q32KG4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rtl9Q32KG4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
Rtl9Q32KG4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rtl9Q32KG4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.01■■■□□ 2.71
Rtl9Q32KG4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Rtl9Q32KG4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rtl9Q32KG4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rtl9Q32KG4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Rtl9Q32KG4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Rtl9Q32KG4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.66■■■□□ 2.66
Rtl9Q32KG4 Gm25238-201ENSMUST00000174914 89 ntBASIC31.65■■■□□ 2.66
Rtl9Q32KG4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtl9Q32KG4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rtl9Q32KG4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtl9Q32KG4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.52■■■□□ 2.64
Rtl9Q32KG4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtl9Q32KG4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtl9Q32KG4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl9Q32KG4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
Rtl9Q32KG4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.96■■■□□ 2.55
Rtl9Q32KG4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rtl9Q32KG4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.87■■■□□ 2.53
Rtl9Q32KG4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtl9Q32KG4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtl9Q32KG4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Rtl9Q32KG4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtl9Q32KG4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.69■■■□□ 2.5
Rtl9Q32KG4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rtl9Q32KG4 Gm27325-201ENSMUST00000175467 74 ntBASIC30.67■■■□□ 2.5
Rtl9Q32KG4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
Rtl9Q32KG4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.64■■■□□ 2.49
Rtl9Q32KG4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rtl9Q32KG4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.49■■■□□ 2.47
Rtl9Q32KG4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl9Q32KG4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rtl9Q32KG4 Gm25262-201ENSMUST00000174934 133 ntBASIC30.34■■■□□ 2.45
Rtl9Q32KG4 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.3■■■□□ 2.44
Rtl9Q32KG4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Rtl9Q32KG4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.27■■■□□ 2.44
Rtl9Q32KG4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtl9Q32KG4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rtl9Q32KG4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
Rtl9Q32KG4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rtl9Q32KG4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rtl9Q32KG4 Rab21-202ENSMUST00000218831 843 ntBASIC30.16■■■□□ 2.42
Rtl9Q32KG4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rtl9Q32KG4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rtl9Q32KG4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.06■■■□□ 2.4
Rtl9Q32KG4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Rtl9Q32KG4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rtl9Q32KG4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rtl9Q32KG4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Rtl9Q32KG4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.88■■■□□ 2.37
Rtl9Q32KG4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.87■■■□□ 2.37
Rtl9Q32KG4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rtl9Q32KG4 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.79■■■□□ 2.36
Rtl9Q32KG4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.77■■■□□ 2.36
Rtl9Q32KG4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.76■■■□□ 2.36
Rtl9Q32KG4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
Rtl9Q32KG4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Rtl9Q32KG4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Rtl9Q32KG4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.73■■■□□ 2.35
Rtl9Q32KG4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rtl9Q32KG4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Rtl9Q32KG4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rtl9Q32KG4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl9Q32KG4 Gm26115-201ENSMUST00000175605 87 ntBASIC29.59■■■□□ 2.33
Rtl9Q32KG4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl9Q32KG4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Rtl9Q32KG4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Rtl9Q32KG4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Rtl9Q32KG4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Rtl9Q32KG4 Gm8109-201ENSMUST00000194076 746 ntBASIC29.45■■■□□ 2.3
Rtl9Q32KG4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.41■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms