RNA–Protein interactions for RNA: tT(CGU)K

TRT2, Transcript of Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRT2, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRT2tT(CGU)K HCM1P25364 564 aa8.75□□□□□ -1.01
TRT2tT(CGU)K YJU2P28320 278 aaPredicted RBP8.75□□□□□ -1.01
TRT2tT(CGU)K RPN2P32565 945 aaKnown RBP8.75□□□□□ -1.01
TRT2tT(CGU)K CDC13P32797 924 aaKnown RBP8.75□□□□□ -1.01
TRT2tT(CGU)K SKN1P33336 771 aa8.75□□□□□ -1.01
TRT2tT(CGU)K ECM4P36156 370 aa8.75□□□□□ -1.01
TRT2tT(CGU)K AHP1P38013 176 aaKnown RBP8.75□□□□□ -1.01
TRT2tT(CGU)K PCF11P39081 626 aaPredicted RBP8.75□□□□□ -1.01
TRT2tT(CGU)K SOP4P39543 234 aaPredicted RBP8.75□□□□□ -1.01
TRT2tT(CGU)K KRE29P40026 464 aa8.75□□□□□ -1.01
TRT2tT(CGU)K STE24P47154 453 aa8.75□□□□□ -1.01
TRT2tT(CGU)K RHO4Q00246 291 aa8.75□□□□□ -1.01
TRT2tT(CGU)K YMR310CQ04867 317 aaPredicted RBP8.75□□□□□ -1.01
TRT2tT(CGU)K RQC1Q05468 723 aaKnown RBP8.75□□□□□ -1.01
TRT2tT(CGU)K RRP12Q12754 1228 aaKnown RBP8.75□□□□□ -1.01
TRT2tT(CGU)K YPL119C-AQ3E751 87 aa8.75□□□□□ -1.01
TRT2tT(CGU)K MET17P06106 444 aa8.74□□□□□ -1.01
TRT2tT(CGU)K PET9P18239 318 aaKnown RBP8.74□□□□□ -1.01
TRT2tT(CGU)K VPS33P20795 691 aa8.74□□□□□ -1.01
TRT2tT(CGU)K NPR1P22211 790 aa8.74□□□□□ -1.01
TRT2tT(CGU)K MGR1P25573 417 aa8.74□□□□□ -1.01
TRT2tT(CGU)K IDH1P28834 360 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
TRT2tT(CGU)K PRO1P32264 428 aa8.74□□□□□ -1.01
TRT2tT(CGU)K OAR1P35731 278 aa8.74□□□□□ -1.01
TRT2tT(CGU)K TEF4P36008 412 aaKnown RBP8.74□□□□□ -1.01
TRT2tT(CGU)K TUL1P36096 758 aa8.74□□□□□ -1.01
TRT2tT(CGU)K PRE6P40303 254 aaKnown RBP8.74□□□□□ -1.01
TRT2tT(CGU)K CIS3P47001 227 aa8.74□□□□□ -1.01
TRT2tT(CGU)K RBL2P48606 106 aaKnown RBP8.74□□□□□ -1.01
TRT2tT(CGU)K UBC9P50623 157 aaPredicted RBP8.74□□□□□ -1.01
TRT2tT(CGU)K SHE4P51534 789 aa8.74□□□□□ -1.01
TRT2tT(CGU)K FHN1P53279 174 aa8.74□□□□□ -1.01
TRT2tT(CGU)K SNF12P53628 566 aa8.74□□□□□ -1.01
TRT2tT(CGU)K HER1Q12276 1246 aa8.74□□□□□ -1.01
TRT2tT(CGU)K SKS1Q12505 502 aa8.74□□□□□ -1.01
TRT2tT(CGU)K MRPL32P25348 183 aa8.73□□□□□ -1.01
TRT2tT(CGU)K RRP7P25368 297 aaPredicted RBP8.73□□□□□ -1.01
TRT2tT(CGU)K MAE1P36013 669 aaKnown RBP8.73□□□□□ -1.01
TRT2tT(CGU)K IPT1P38954 527 aa8.73□□□□□ -1.01
TRT2tT(CGU)K RCY1P39531 840 aa8.73□□□□□ -1.01
TRT2tT(CGU)K RPL10P41805 221 aaKnown RBP8.73□□□□□ -1.01
TRT2tT(CGU)K IRC5P43610 853 aa8.73□□□□□ -1.01
TRT2tT(CGU)K BIT61P47041 543 aa8.73□□□□□ -1.01
TRT2tT(CGU)K ART5P53244 586 aaKnown RBP8.73□□□□□ -1.01
TRT2tT(CGU)K TWF1P53250 332 aa8.73□□□□□ -1.01
TRT2tT(CGU)K YNR014WP53719 212 aa8.73□□□□□ -1.01
TRT2tT(CGU)K SRL4Q03085 281 aa8.73□□□□□ -1.01
TRT2tT(CGU)K MMT2Q08970 484 aa8.73□□□□□ -1.01
TRT2tT(CGU)K LEU9Q12166 604 aaKnown RBP8.73□□□□□ -1.01
TRT2tT(CGU)K NFI1Q12216 726 aa8.73□□□□□ -1.01
TRT2tT(CGU)K BMT6Q12291 365 aa8.73□□□□□ -1.01
TRT2tT(CGU)K YDR262WQ12331 272 aa8.73□□□□□ -1.01
TRT2tT(CGU)K TRM10Q12400 293 aa8.73□□□□□ -1.01
TRT2tT(CGU)K YKL033W-AQ86ZR7 236 aa8.73□□□□□ -1.01
TRT2tT(CGU)K SRB5P32585 307 aa8.72□□□□□ -1.01
TRT2tT(CGU)K MNL1P38888 796 aa8.72□□□□□ -1.01
TRT2tT(CGU)K ISC1P40015 477 aaKnown RBP8.72□□□□□ -1.01
TRT2tT(CGU)K SOK1P40317 901 aa8.72□□□□□ -1.01
TRT2tT(CGU)K MET28P40573 187 aa8.72□□□□□ -1.01
TRT2tT(CGU)K SNM1P40993 198 aa8.72□□□□□ -1.01
TRT2tT(CGU)K ROM1P53046 1155 aa8.72□□□□□ -1.01
TRT2tT(CGU)K CDH1P53197 566 aa8.72□□□□□ -1.01
TRT2tT(CGU)K YGR168CP53293 376 aa8.72□□□□□ -1.01
TRT2tT(CGU)K TPS1Q00764 495 aaKnown RBP8.72□□□□□ -1.01
TRT2tT(CGU)K ARP10Q04549 284 aa8.72□□□□□ -1.01
TRT2tT(CGU)K FMP42Q04991 504 aa8.72□□□□□ -1.01
TRT2tT(CGU)K ISR1Q06098 443 aaKnown RBP8.72□□□□□ -1.01
TRT2tT(CGU)K IRC13Q08630 104 aa8.72□□□□□ -1.01
TRT2tT(CGU)K YTM1Q12024 460 aaPredicted RBP8.72□□□□□ -1.01
TRT2tT(CGU)K GLO4Q12320 285 aa8.72□□□□□ -1.01
TRT2tT(CGU)K PST2Q12335 198 aaKnown RBP8.72□□□□□ -1.01
TRT2tT(CGU)K RPB5P20434 215 aa8.71□□□□□ -1.02
TRT2tT(CGU)K SLY41P22215 453 aa8.71□□□□□ -1.02
TRT2tT(CGU)K RNQ1P25367 405 aa8.71□□□□□ -1.02
TRT2tT(CGU)K TAH1P25638 111 aaPredicted RBP8.71□□□□□ -1.02
TRT2tT(CGU)K UTP11P34247 250 aaPredicted RBP8.71□□□□□ -1.02
TRT2tT(CGU)K AST2P39945 430 aaKnown RBP8.71□□□□□ -1.02
TRT2tT(CGU)K SWP82P43554 623 aa8.71□□□□□ -1.02
TRT2tT(CGU)K HOC1P47124 396 aa8.71□□□□□ -1.02
TRT2tT(CGU)K HOS2P53096 452 aaPredicted RBP8.71□□□□□ -1.02
TRT2tT(CGU)K YMD8Q03697 442 aa8.71□□□□□ -1.02
TRT2tT(CGU)K YML053CQ04978 212 aa8.71□□□□□ -1.02
TRT2tT(CGU)K YLR345WQ06137 509 aa8.71□□□□□ -1.02
TRT2tT(CGU)K MCM21Q06675 368 aa8.71□□□□□ -1.02
TRT2tT(CGU)K FDH1Q08911 376 aa8.71□□□□□ -1.02
TRT2tT(CGU)K BSC1Q12140 328 aa8.71□□□□□ -1.02
TRT2tT(CGU)K YPL066WQ12194 479 aa8.71□□□□□ -1.02
TRT2tT(CGU)K RPC40P07703 335 aaKnown RBP8.7□□□□□ -1.02
TRT2tT(CGU)K TRM1P15565 570 aaKnown RBP8.7□□□□□ -1.02
TRT2tT(CGU)K SEC2P17065 759 aa8.7□□□□□ -1.02
TRT2tT(CGU)K CLB2P24869 491 aa8.7□□□□□ -1.02
TRT2tT(CGU)K BUD5P25300 642 aaPredicted RBP8.7□□□□□ -1.02
TRT2tT(CGU)K ASF2P32448 525 aaPredicted RBP8.7□□□□□ -1.02
TRT2tT(CGU)K NRP1P32770 719 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
TRT2tT(CGU)K RRG9P40156 214 aa8.7□□□□□ -1.02
TRT2tT(CGU)K TED1P40533 473 aa8.7□□□□□ -1.02
TRT2tT(CGU)K SUN4P53616 420 aa8.7□□□□□ -1.02
TRT2tT(CGU)K ASI1P54074 624 aa8.7□□□□□ -1.02
TRT2tT(CGU)K GRX5Q02784 150 aa8.7□□□□□ -1.02
TRT2tT(CGU)K ELP4Q02884 456 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms