RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	SNO1	Q03144	224 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	YLR283W	Q05867	314 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	VTA1	Q06263	330 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	ATG33	Q06485	197 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	RXT3	Q07458	294 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	YFH1	Q07540	174 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	SKI7	Q08491	747 aa	Predicted RBP	4.7	□□□□□ -1.66
PXA1	YPL147W	DFG16	Q99234	619 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	RHO1	P06780	209 aa	Known RBP	4.7	□□□□□ -1.66
PXA1	YPL147W	ADE5,7	P07244	802 aa	Known RBP	4.7	□□□□□ -1.66
PXA1	YPL147W	RRT12	P25381	491 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	CWP1	P28319	239 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	IMP3	P32899	183 aa	Predicted RBP	4.7	□□□□□ -1.66
PXA1	YPL147W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
PXA1	YPL147W	VID24	P38263	362 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	YEL020C	P39994	560 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	SCS2	P40075	244 aa	Known RBP	4.7	□□□□□ -1.66
PXA1	YPL147W	CIN1	P40987	1014 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	YJL118W	P47022	219 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	FAR10	Q06001	478 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	RRG8	Q06109	277 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	PAM18	Q07914	168 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	YNG1	Q08465	219 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	ATG34	Q12292	412 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	WIP1	Q2V2P8	89 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	YIR021W-A	Q3E739	70 aa		4.7	□□□□□ -1.66
PXA1	YPL147W	PET54	P10834	293 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	HEM13	P11353	328 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	CNA1	P23287	553 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	MEK1	P24719	497 aa	Predicted RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	RPS5	P26783	225 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	UPS2	P35200	230 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	MMS21	P38632	267 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	NVJ1	P38881	321 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	AKR1	P39010	764 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YIL108W	P40483	696 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	MET28	P40573	187 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	TOS3	P43637	560 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YMR209C	Q03648	457 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YDR249C	Q03787	373 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	HED1	Q03937	162 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	APC4	Q04601	652 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	SOV1	Q04748	898 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	NEJ1	Q06148	342 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	THI22	Q06490	572 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YET3	Q07451	203 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YOR365C	Q08844	703 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YPR071W	Q12346	211 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YBR121C-A	P0C5L4	52 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	RPS4A	P0CX35	261 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	RPS4B	P0CX36	261 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	STF2	P16965	84 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YCR061W	P25639	631 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YKL107W	P34251	309 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YBR259W	P38338	688 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	SDP1	P40479	209 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	OPT1	P40897	799 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	ULI1	P43604	169 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	BIT61	P47041	543 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YNL040W	P53960	456 aa	Predicted RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	YPL034W	Q03083	165 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	TIF35	Q04067	274 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	RRP45	Q05636	305 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	YPL199C	Q08954	240 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
PXA1	YPL147W	EFG1	Q3E705	233 aa	Known RBP	4.69	□□□□□ -1.66
PXA1	YPL147W	SLO1	Q3E784	85 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	YLR361C-A	Q3E795	98 aa		4.69	□□□□□ -1.66
PXA1	YPL147W	QCR7	P00128	127 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	SCH9	P11792	824 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	IFM1	P25038	676 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	HCM1	P25364	564 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	DCC1	P25559	380 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	GSY2	P27472	705 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	PYC2	P32327	1180 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	HOG1	P32485	435 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	LDB7	P38210	180 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	RFS1	P38234	210 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	AIM46	P38885	310 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	SLZ1	P40167	298 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	NOP19	P53317	196 aa	Predicted RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	IMP4	P53941	290 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	RPS15	Q01855	142 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	SKI8	Q02793	397 aa	Predicted RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	FRK1	Q03002	865 aa	Predicted RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	OST6	Q03723	332 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	TRM82	Q03774	444 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	CSM3	Q04659	317 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	SHS1	Q07657	551 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	NSE1	Q07913	336 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	ZEO1	Q08245	113 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	SAM4	Q08985	325 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	MLH3	Q12083	715 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	WTM1	Q12363	437 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	PSF1	Q12488	208 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	DCP1	Q12517	231 aa	Predicted RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	DED1	P06634	604 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	ILV2	P07342	687 aa	Known RBP	4.68	□□□□□ -1.66
PXA1	YPL147W	PUT1	P09368	476 aa		4.68	□□□□□ -1.66
PXA1	YPL147W	RPS21A	P0C0V8	87 aa	Known RBP	4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms