RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W MRPL22P53881 309 aa2.12□□□□□ -2.07
SEC16YPL085W LRS4Q04087 347 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W COX20Q04935 205 aa2.12□□□□□ -2.07
SEC16YPL085W ISR1Q06098 443 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W DIC1Q06143 298 aa2.12□□□□□ -2.07
SEC16YPL085W RTK1Q12100 620 aaPredicted RBP2.12□□□□□ -2.07
SEC16YPL085W NDJ1Q12366 352 aa2.12□□□□□ -2.07
SEC16YPL085W PDH1Q12428 516 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W OCA6Q12454 224 aa2.12□□□□□ -2.07
SEC16YPL085W CCR4P31384 837 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W TRM7P38238 310 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W HSL7P38274 827 aa2.12□□□□□ -2.07
SEC16YPL085W MUP3P38734 546 aa2.12□□□□□ -2.07
SEC16YPL085W YHR219WP38900 624 aa2.12□□□□□ -2.07
SEC16YPL085W GGC1P38988 300 aa2.12□□□□□ -2.07
SEC16YPL085W GDI1P39958 451 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W SEC24P40482 926 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W GDS1P41913 522 aa2.12□□□□□ -2.07
SEC16YPL085W STR2P47164 639 aa2.12□□□□□ -2.07
SEC16YPL085W CLD1P53264 445 aa2.12□□□□□ -2.07
SEC16YPL085W NUP100Q02629 959 aa2.12□□□□□ -2.07
SEC16YPL085W ARV1Q06541 321 aa2.12□□□□□ -2.07
SEC16YPL085W RPN6Q12377 434 aa2.12□□□□□ -2.07
SEC16YPL085W PNS1Q12412 539 aa2.12□□□□□ -2.07
SEC16YPL085W YBL113CQ7M4S9 792 aa2.12□□□□□ -2.07
SEC16YPL085W LEU4P06208 619 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W SEC59P20048 519 aa2.12□□□□□ -2.07
SEC16YPL085W RPB5P20434 215 aa2.12□□□□□ -2.07
SEC16YPL085W DAL2P25335 343 aa2.12□□□□□ -2.07
SEC16YPL085W YCL068CP25593 260 aa2.12□□□□□ -2.07
SEC16YPL085W YKL075CP36083 450 aa2.12□□□□□ -2.07
SEC16YPL085W MAL32P38158 584 aa2.12□□□□□ -2.07
SEC16YPL085W YHR122WP38829 231 aa2.12□□□□□ -2.07
SEC16YPL085W YIL166CP40445 542 aa2.12□□□□□ -2.07
SEC16YPL085W YJL055WP47044 245 aa2.12□□□□□ -2.07
SEC16YPL085W COG1P53079 417 aa2.12□□□□□ -2.07
SEC16YPL085W SYF2P53277 215 aaPredicted RBP2.12□□□□□ -2.07
SEC16YPL085W SLU7Q02775 382 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W RIM13Q03792 727 aa2.12□□□□□ -2.07
SEC16YPL085W TPP1Q03796 238 aa2.12□□□□□ -2.07
SEC16YPL085W COQ11Q05892 277 aa2.12□□□□□ -2.07
SEC16YPL085W YPD1Q07688 167 aa2.12□□□□□ -2.07
SEC16YPL085W SRL2Q12020 392 aa2.12□□□□□ -2.07
SEC16YPL085W PCL9Q12477 304 aa2.12□□□□□ -2.07
SEC16YPL085W GCN4P03069 281 aa2.12□□□□□ -2.07
SEC16YPL085W PDE2P06776 526 aa2.12□□□□□ -2.07
SEC16YPL085W SNC1P31109 117 aa2.12□□□□□ -2.07
SEC16YPL085W NUP2P32499 720 aa2.12□□□□□ -2.07
SEC16YPL085W YHI9P38765 294 aa2.12□□□□□ -2.07
SEC16YPL085W FLC2P39719 783 aa2.12□□□□□ -2.07
SEC16YPL085W HEM14P40012 539 aa2.12□□□□□ -2.07
SEC16YPL085W GVP36P40531 326 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W PFD1P46988 109 aa2.12□□□□□ -2.07
SEC16YPL085W STE24P47154 453 aa2.12□□□□□ -2.07
SEC16YPL085W HXT16P47185 567 aa2.12□□□□□ -2.07
SEC16YPL085W ERG13P54839 491 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W ARP4P80428 489 aa2.12□□□□□ -2.07
SEC16YPL085W YMR206WQ03695 313 aa2.12□□□□□ -2.07
SEC16YPL085W YDR249CQ03787 373 aa2.12□□□□□ -2.07
SEC16YPL085W TMN2Q04562 672 aa2.12□□□□□ -2.07
SEC16YPL085W YLR283WQ05867 314 aa2.12□□□□□ -2.07
SEC16YPL085W YLR257WQ06146 321 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W SMF3Q12078 473 aaPredicted RBP2.12□□□□□ -2.07
SEC16YPL085W ERP4Q12450 207 aa2.12□□□□□ -2.07
SEC16YPL085W PEX11Q12462 236 aa2.12□□□□□ -2.07
SEC16YPL085W PEP4P07267 405 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W URA6P15700 204 aa2.12□□□□□ -2.07
SEC16YPL085W UBP11P36026 717 aa2.12□□□□□ -2.07
SEC16YPL085W HXT6P39003 570 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W HXT7P39004 570 aa2.12□□□□□ -2.07
SEC16YPL085W FKH2P41813 862 aa2.12□□□□□ -2.07
SEC16YPL085W MNN5P46982 586 aa2.12□□□□□ -2.07
SEC16YPL085W ZAP1P47043 880 aa2.12□□□□□ -2.07
SEC16YPL085W MUP1P50276 574 aa2.12□□□□□ -2.07
SEC16YPL085W KXD1P53158 218 aa2.12□□□□□ -2.07
SEC16YPL085W SPC98P53540 846 aa2.12□□□□□ -2.07
SEC16YPL085W YLR179CQ06252 201 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W CWC2Q12046 339 aaPredicted RBP2.12□□□□□ -2.07
SEC16YPL085W USB1Q12208 290 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W NSI1Q12457 570 aa2.12□□□□□ -2.07
SEC16YPL085W CMC2Q3E7A4 109 aa2.12□□□□□ -2.07
SEC16YPL085W AFI1Q99222 893 aa2.12□□□□□ -2.07
SEC16YPL085W MSW1P04803 379 aa2.11□□□□□ -2.07
SEC16YPL085W HIS5P07172 385 aa2.11□□□□□ -2.07
SEC16YPL085W FUM1P08417 488 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W ZWF1P11412 505 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W MRM1P25270 412 aa2.11□□□□□ -2.07
SEC16YPL085W YPK3P38070 525 aa2.11□□□□□ -2.07
SEC16YPL085W RTC2P38279 296 aa2.11□□□□□ -2.07
SEC16YPL085W SUR2P38992 349 aa2.11□□□□□ -2.07
SEC16YPL085W DCP2P53550 970 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W SWF1Q04629 336 aa2.11□□□□□ -2.07
SEC16YPL085W RSF1Q05043 376 aa2.11□□□□□ -2.07
SEC16YPL085W YLR046CQ12253 270 aa2.11□□□□□ -2.07
SEC16YPL085W YCR016WP25617 290 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W BUB2P26448 306 aaPredicted RBP2.11□□□□□ -2.07
SEC16YPL085W CIN8P27895 1000 aa2.11□□□□□ -2.07
SEC16YPL085W PEP7P32609 515 aa2.11□□□□□ -2.07
SEC16YPL085W SPO73P40031 143 aa2.11□□□□□ -2.07
SEC16YPL085W LRO1P40345 661 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms