RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W YHL041WP38730 149 aa5.68□□□□□ -1.5
VPS5YOR069W IRC7P43623 340 aa5.68□□□□□ -1.5
VPS5YOR069W DLD2P46681 530 aaKnown RBP5.68□□□□□ -1.5
VPS5YOR069W PET130P47065 347 aa5.68□□□□□ -1.5
VPS5YOR069W LSM8P47093 109 aaKnown RBP5.68□□□□□ -1.5
VPS5YOR069W IMO32P53219 342 aa5.68□□□□□ -1.5
VPS5YOR069W IRC15Q02733 499 aa5.68□□□□□ -1.5
VPS5YOR069W YDR541CQ03049 344 aa5.68□□□□□ -1.5
VPS5YOR069W YML020WQ03722 664 aa5.68□□□□□ -1.5
VPS5YOR069W SNX41Q04053 625 aa5.68□□□□□ -1.5
VPS5YOR069W HRD3Q05787 833 aa5.68□□□□□ -1.5
VPS5YOR069W YLR446WQ06204 433 aa5.68□□□□□ -1.5
VPS5YOR069W TPO3Q06451 622 aa5.68□□□□□ -1.5
VPS5YOR069W YLR352WQ06479 807 aa5.68□□□□□ -1.5
VPS5YOR069W YOR238WQ08634 303 aa5.68□□□□□ -1.5
VPS5YOR069W YTM1Q12024 460 aaPredicted RBP5.68□□□□□ -1.5
VPS5YOR069W YRM1Q12340 786 aa5.68□□□□□ -1.5
VPS5YOR069W CSR2Q12734 1121 aa5.68□□□□□ -1.5
VPS5YOR069W KAR1P11927 433 aa5.67□□□□□ -1.5
VPS5YOR069W MET8P15807 274 aa5.67□□□□□ -1.5
VPS5YOR069W RRP7P25368 297 aaPredicted RBP5.67□□□□□ -1.5
VPS5YOR069W SYP1P25623 870 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W SEC17P32602 292 aa5.67□□□□□ -1.5
VPS5YOR069W PET127P32606 800 aa5.67□□□□□ -1.5
VPS5YOR069W YPT7P32939 208 aa5.67□□□□□ -1.5
VPS5YOR069W RPT1P33299 467 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W YKL077WP36081 392 aa5.67□□□□□ -1.5
VPS5YOR069W APL3P38065 1025 aa5.67□□□□□ -1.5
VPS5YOR069W YBR063CP38083 404 aa5.67□□□□□ -1.5
VPS5YOR069W SHE3P38272 425 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W YHR035WP38769 630 aa5.67□□□□□ -1.5
VPS5YOR069W BFR1P38934 470 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
VPS5YOR069W AIM10P39965 576 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W YMR144WP40214 342 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W ALG8P40351 577 aa5.67□□□□□ -1.5
VPS5YOR069W YGR067CP53243 804 aa5.67□□□□□ -1.5
VPS5YOR069W CWC24P53769 259 aa5.67□□□□□ -1.5
VPS5YOR069W YAF9P53930 226 aa5.67□□□□□ -1.5
VPS5YOR069W YMR279CQ03263 540 aa5.67□□□□□ -1.5
VPS5YOR069W TDA1Q03533 586 aa5.67□□□□□ -1.5
VPS5YOR069W FRE5Q08908 694 aa5.67□□□□□ -1.5
VPS5YOR069W MED4Q12343 284 aa5.67□□□□□ -1.5
VPS5YOR069W TY1A-DR3Q12441 440 aa5.67□□□□□ -1.5
VPS5YOR069W SFG1Q12507 346 aa5.67□□□□□ -1.5
VPS5YOR069W YLR149CQ99296 730 aa5.67□□□□□ -1.5
VPS5YOR069W GAL1P04385 528 aa5.67□□□□□ -1.5
VPS5YOR069W MAG1P22134 296 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W RPS1BP23248 255 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W PRP28P23394 588 aa5.67□□□□□ -1.5
VPS5YOR069W BUD5P25300 642 aaPredicted RBP5.67□□□□□ -1.5
VPS5YOR069W YBL010CP32788 280 aa5.67□□□□□ -1.5
VPS5YOR069W PDC2P32896 925 aa5.67□□□□□ -1.5
VPS5YOR069W VPS17P32913 551 aa5.67□□□□□ -1.5
VPS5YOR069W MKS1P34072 584 aa5.67□□□□□ -1.5
VPS5YOR069W YKL151CP36059 337 aa5.67□□□□□ -1.5
VPS5YOR069W ALY1P36117 915 aa5.67□□□□□ -1.5
VPS5YOR069W FUI1P38196 639 aa5.67□□□□□ -1.5
VPS5YOR069W COS111P38308 924 aa5.67□□□□□ -1.5
VPS5YOR069W URA8P38627 578 aaPredicted RBP5.67□□□□□ -1.5
VPS5YOR069W NSG1P38837 291 aa5.67□□□□□ -1.5
VPS5YOR069W LSM5P40089 93 aaKnown RBP5.67□□□□□ -1.5
VPS5YOR069W EAF6P47128 113 aa5.67□□□□□ -1.5
VPS5YOR069W HOS2P53096 452 aaPredicted RBP5.67□□□□□ -1.5
VPS5YOR069W BUD9P53226 547 aa5.67□□□□□ -1.5
VPS5YOR069W YGR117CP53270 476 aa5.67□□□□□ -1.5
VPS5YOR069W PLB2Q03674 706 aa5.67□□□□□ -1.5
VPS5YOR069W YMR130WQ04223 302 aa5.67□□□□□ -1.5
VPS5YOR069W NNT1Q05874 261 aa5.67□□□□□ -1.5
VPS5YOR069W SKI7Q08491 747 aaPredicted RBP5.67□□□□□ -1.5
VPS5YOR069W RPP1AP05318 106 aaPredicted RBP5.66□□□□□ -1.5
VPS5YOR069W SIR2P06700 562 aa5.66□□□□□ -1.5
VPS5YOR069W CHL1P22516 861 aaPredicted RBP5.66□□□□□ -1.5
VPS5YOR069W DBP1P24784 617 aaKnown RBP5.66□□□□□ -1.5
VPS5YOR069W RNA14P25298 677 aaKnown RBP5.66□□□□□ -1.5
VPS5YOR069W COQ2P32378 372 aa5.66□□□□□ -1.5
VPS5YOR069W ISC10P32645 267 aa5.66□□□□□ -1.5
VPS5YOR069W SRY1P36007 326 aa5.66□□□□□ -1.5
VPS5YOR069W BAP3P41815 604 aa5.66□□□□□ -1.5
VPS5YOR069W MSS11Q03825 758 aa5.66□□□□□ -1.5
VPS5YOR069W CRR1Q05790 422 aa5.66□□□□□ -1.5
VPS5YOR069W YLR346CQ06139 101 aa5.66□□□□□ -1.5
VPS5YOR069W HBT1Q07653 1046 aaKnown RBP5.66□□□□□ -1.5
VPS5YOR069W NMD4Q12129 218 aa5.66□□□□□ -1.5
VPS5YOR069W SVS1Q12254 260 aa5.66□□□□□ -1.5
VPS5YOR069W YLR108CQ12259 485 aa5.66□□□□□ -1.5
VPS5YOR069W PRP2P20095 876 aaPredicted RBP5.65□□□□□ -1.5
VPS5YOR069W UTR1P21373 530 aa5.65□□□□□ -1.5
VPS5YOR069W RSA4P25382 515 aaKnown RBP5.65□□□□□ -1.5
VPS5YOR069W IDH1P28834 360 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
VPS5YOR069W SFP1P32432 683 aa5.65□□□□□ -1.5
VPS5YOR069W SRB6P32570 121 aa5.65□□□□□ -1.5
VPS5YOR069W CTF13P35203 478 aa5.65□□□□□ -1.5
VPS5YOR069W YCR087C-AP37263 153 aa5.65□□□□□ -1.5
VPS5YOR069W CDS1P38221 457 aa5.65□□□□□ -1.5
VPS5YOR069W LAG1P38703 411 aa5.65□□□□□ -1.5
VPS5YOR069W CTF8P38877 133 aa5.65□□□□□ -1.5
VPS5YOR069W TIF11P38912 153 aaKnown RBP5.65□□□□□ -1.5
VPS5YOR069W GID8P40208 455 aa5.65□□□□□ -1.5
VPS5YOR069W FMC1P40491 155 aa5.65□□□□□ -1.5
VPS5YOR069W IST3P40565 148 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms