RNA–Protein interactions for RNA: YOR047C

STD1, Transcript of Protein involved in control of glucose-regulated gene expression, yeast

Gene STD1, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STD1	YOR047C	LCB3	P47013	409 aa		2.8	□□□□□ -1.96
STD1	YOR047C	YPR195C	Q06594	109 aa		2.8	□□□□□ -1.96
STD1	YOR047C	RKM1	Q08961	583 aa	Predicted RBP	2.8	□□□□□ -1.96
STD1	YOR047C	SOR1	P35497	357 aa	Known RBP	2.79	□□□□□ -1.96
STD1	YOR047C	YHK8	P38776	514 aa		2.79	□□□□□ -1.96
STD1	YOR047C	SVL3	Q03088	825 aa	Known RBP	2.79	□□□□□ -1.96
STD1	YOR047C	YDL121C	Q07541	149 aa		2.79	□□□□□ -1.96
STD1	YOR047C	SOR2	Q07786	357 aa		2.79	□□□□□ -1.96
STD1	YOR047C	SIL1	Q08199	421 aa		2.79	□□□□□ -1.96
STD1	YOR047C	EAF3	Q12432	401 aa		2.79	□□□□□ -1.96
STD1	YOR047C	IMP2'	P32351	346 aa		2.78	□□□□□ -1.96
STD1	YOR047C	DPH5	P32469	300 aa	Predicted RBP	2.78	□□□□□ -1.96
STD1	YOR047C	COX13	P32799	129 aa		2.78	□□□□□ -1.96
STD1	YOR047C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.78	□□□□□ -1.96	not detected
STD1	YOR047C	TDA1	Q03533	586 aa		2.78	□□□□□ -1.96
STD1	YOR047C	TPI1	P00942	248 aa	Known RBP	2.77	□□□□□ -1.97
STD1	YOR047C	ARG3	P05150	338 aa		2.77	□□□□□ -1.97
STD1	YOR047C	MFG1	Q07684	458 aa		2.77	□□□□□ -1.97
STD1	YOR047C	APC2	Q12440	853 aa		2.77	□□□□□ -1.97
STD1	YOR047C	REV3	P14284	1504 aa		2.77	□□□□□ -1.97
STD1	YOR047C	SCEI	P03882	235 aa		2.76	□□□□□ -1.97
STD1	YOR047C	PIS1	P06197	220 aa	Known RBP	2.76	□□□□□ -1.97
STD1	YOR047C	RPL3	P14126	387 aa	Known RBP	2.76	□□□□□ -1.97
STD1	YOR047C	GEX1	P25596	615 aa		2.76	□□□□□ -1.97
STD1	YOR047C	BEM1	P29366	551 aa		2.76	□□□□□ -1.97
STD1	YOR047C	YEF1	P32622	495 aa		2.76	□□□□□ -1.97
STD1	YOR047C	CYM1	P32898	989 aa		2.76	□□□□□ -1.97
STD1	YOR047C	PRY2	P36110	329 aa		2.76	□□□□□ -1.97
STD1	YOR047C	RRP4	P38792	359 aa	Known RBP	2.76	□□□□□ -1.97
STD1	YOR047C	CHL4	P38907	458 aa		2.76	□□□□□ -1.97
STD1	YOR047C	PHO86	P46956	311 aa		2.76	□□□□□ -1.97
STD1	YOR047C	MNP1	P53163	194 aa	Predicted RBP	2.76	□□□□□ -1.97
STD1	YOR047C	TIM10	P87108	93 aa		2.76	□□□□□ -1.97
STD1	YOR047C	BUG1	Q12191	341 aa		2.76	□□□□□ -1.97
STD1	YOR047C	ATG34	Q12292	412 aa		2.76	□□□□□ -1.97
STD1	YOR047C	MDS3	P53094	1487 aa		2.75	□□□□□ -1.97
STD1	YOR047C	YBR056W	P38081	501 aa		2.75	□□□□□ -1.97
STD1	YOR047C	ARF3	P40994	183 aa	RIP-Chip data	2.75	□□□□□ -1.97	RIP-Chip
STD1	YOR047C	RPL21A	Q02753	160 aa	Known RBP	2.75	□□□□□ -1.97
STD1	YOR047C	RPL21B	Q12672	160 aa	Known RBP	2.75	□□□□□ -1.97
STD1	YOR047C	THO2	P53552	1597 aa	Known RBP	2.75	□□□□□ -1.97
STD1	YOR047C	PFS1	P38872	237 aa		2.74	□□□□□ -1.97
STD1	YOR047C	UTP9	P38882	575 aa	Known RBP	2.74	□□□□□ -1.97
STD1	YOR047C	YGR067C	P53243	804 aa		2.74	□□□□□ -1.97
STD1	YOR047C	BUD21	Q08492	214 aa	Predicted RBP	2.74	□□□□□ -1.97
STD1	YOR047C	VAM3	Q12241	283 aa		2.74	□□□□□ -1.97
STD1	YOR047C	GRX6	Q12438	231 aa		2.74	□□□□□ -1.97
STD1	YOR047C	PUT4	P15380	627 aa		2.73	□□□□□ -1.97
STD1	YOR047C	EXG1	P23776	448 aa	Known RBP	2.73	□□□□□ -1.97
STD1	YOR047C	ATP3	P38077	311 aa	Known RBP	2.73	□□□□□ -1.97
STD1	YOR047C	SMF1	P38925	575 aa		2.73	□□□□□ -1.97
STD1	YOR047C	VHT1	P53241	593 aa		2.73	□□□□□ -1.97
STD1	YOR047C	YGR250C	P53316	781 aa	Known RBP	2.73	□□□□□ -1.97
STD1	YOR047C	URH1	Q04179	340 aa		2.73	□□□□□ -1.97
STD1	YOR047C	PRM6	Q04705	352 aa		2.73	□□□□□ -1.97
STD1	YOR047C	YDR061W	Q12298	539 aa		2.73	□□□□□ -1.97
STD1	YOR047C	RRI2	Q12348	645 aa		2.73	□□□□□ -1.97
STD1	YOR047C	CEX1	Q12453	761 aa		2.73	□□□□□ -1.97
STD1	YOR047C	UFD4	P33202	1483 aa		2.73	□□□□□ -1.97
STD1	YOR047C	FRT2	P39734	528 aa		2.72	□□□□□ -1.97
STD1	YOR047C	VPS72	Q03388	795 aa		2.72	□□□□□ -1.97
STD1	YOR047C	RRP45	Q05636	305 aa	Known RBP	2.72	□□□□□ -1.97
STD1	YOR047C	RPS19A	P07280	144 aa	Known RBP	2.71	□□□□□ -1.98
STD1	YOR047C	RPS19B	P07281	144 aa	Predicted RBP	2.71	□□□□□ -1.98
STD1	YOR047C	CAP2	P13517	287 aa		2.71	□□□□□ -1.98
STD1	YOR047C	CLC1	P17891	233 aa		2.71	□□□□□ -1.98
STD1	YOR047C	YME2	P32843	850 aa		2.71	□□□□□ -1.98
STD1	YOR047C	PTK1	P36002	662 aa	Predicted RBP	2.71	□□□□□ -1.98
STD1	YOR047C	COS5	P47187	383 aa		2.71	□□□□□ -1.98
STD1	YOR047C	YLR345W	Q06137	509 aa		2.71	□□□□□ -1.98
STD1	YOR047C	COS7	Q07788	383 aa		2.71	□□□□□ -1.98
STD1	YOR047C	MED1	Q12321	566 aa		2.71	□□□□□ -1.98
STD1	YOR047C	STE7	P06784	515 aa		2.7	□□□□□ -1.98
STD1	YOR047C	BPT1	P14772	1559 aa		2.7	□□□□□ -1.98
STD1	YOR047C	HOM3	P10869	527 aa		2.69	□□□□□ -1.98
STD1	YOR047C	MRP7	P12687	371 aa		2.69	□□□□□ -1.98
STD1	YOR047C	NTC20	P38302	140 aa	Predicted RBP	2.69	□□□□□ -1.98
STD1	YOR047C	AIP1	P46680	615 aa	Known RBP	2.69	□□□□□ -1.98
STD1	YOR047C	CPR7	P47103	393 aa		2.69	□□□□□ -1.98
STD1	YOR047C	RPN14	P53196	417 aa		2.69	□□□□□ -1.98
STD1	YOR047C	TSR2	Q06672	205 aa	Known RBP	2.69	□□□□□ -1.98
STD1	YOR047C	RPN12	P32496	274 aa		2.68	□□□□□ -1.98
STD1	YOR047C	SKN1	P33336	771 aa		2.68	□□□□□ -1.98
STD1	YOR047C	RRN10	P38204	145 aa		2.68	□□□□□ -1.98
STD1	YOR047C	RPA49	Q01080	415 aa	Predicted RBP	2.68	□□□□□ -1.98
STD1	YOR047C	NCA2	Q12374	616 aa		2.68	□□□□□ -1.98
STD1	YOR047C	HTZ1	Q12692	134 aa	Known RBP	2.68	□□□□□ -1.98
STD1	YOR047C	MET17	P06106	444 aa		2.68	□□□□□ -1.98
STD1	YOR047C	PEX22	P39718	180 aa		2.68	□□□□□ -1.98
STD1	YOR047C	YIR035C	P40579	254 aa		2.68	□□□□□ -1.98
STD1	YOR047C	TOS3	P43637	560 aa		2.68	□□□□□ -1.98
STD1	YOR047C	COS1	P53822	381 aa		2.68	□□□□□ -1.98
STD1	YOR047C	YDL114W	Q07530	308 aa		2.68	□□□□□ -1.98
STD1	YOR047C	PEP1	P32319	1579 aa		2.67	□□□□□ -1.98
STD1	YOR047C	ATG2	P53855	1592 aa		2.67	□□□□□ -1.98
STD1	YOR047C	SIN3	P22579	1536 aa		2.67	□□□□□ -1.98
STD1	YOR047C	YPK9	Q12697	1472 aa		2.67	□□□□□ -1.98
STD1	YOR047C	STH1	P32597	1359 aa		2.67	□□□□□ -1.98
STD1	YOR047C	SAL1	D6W196	494 aa		2.67	□□□□□ -1.98
STD1	YOR047C	CKA1	P15790	372 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms