RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C YAR1P46683 200 aa2.94□□□□□ -1.94
SSN8YNL025C MSY1P48527 492 aa2.94□□□□□ -1.94
SSN8YNL025C ROG1P53118 685 aa2.94□□□□□ -1.94
SSN8YNL025C PXR1P53335 271 aaPredicted RBP2.94□□□□□ -1.94
SSN8YNL025C DIP5P53388 608 aa2.94□□□□□ -1.94
SSN8YNL025C OCA2P53949 197 aa2.94□□□□□ -1.94
SSN8YNL025C SPP2Q02521 185 aa2.94□□□□□ -1.94
SSN8YNL025C STD1Q02794 444 aa2.94□□□□□ -1.94
SSN8YNL025C MRP51Q02950 344 aa2.94□□□□□ -1.94
SSN8YNL025C PRM15Q03262 622 aa2.94□□□□□ -1.94
SSN8YNL025C EBS1Q03466 884 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C TAF12Q03761 539 aa2.94□□□□□ -1.94
SSN8YNL025C RPC11Q04307 110 aaPredicted RBP2.94□□□□□ -1.94
SSN8YNL025C YDR109CQ04585 715 aa2.94□□□□□ -1.94
SSN8YNL025C PIG1Q06216 648 aa2.94□□□□□ -1.94
SSN8YNL025C ATG17Q06410 417 aa2.94□□□□□ -1.94
SSN8YNL025C YDL086WQ07505 273 aa2.94□□□□□ -1.94
SSN8YNL025C CYK3Q07533 885 aa2.94□□□□□ -1.94
SSN8YNL025C AAD15Q08361 143 aa2.94□□□□□ -1.94
SSN8YNL025C DNL4Q08387 944 aaPredicted RBP2.94□□□□□ -1.94
SSN8YNL025C YRA1Q12159 226 aaKnown RBP2.94□□□□□ -1.94
SSN8YNL025C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SSN8YNL025C YLR108CQ12259 485 aa2.94□□□□□ -1.94
SSN8YNL025C YPR1Q12458 312 aa2.94□□□□□ -1.94
SSN8YNL025C RGS2Q99188 309 aa2.94□□□□□ -1.94
SSN8YNL025C HIS4P00815 799 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C ADE5,7P07244 802 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C RIP1P08067 215 aa2.93□□□□□ -1.94
SSN8YNL025C MATALPHA2P0CY08 210 aa2.93□□□□□ -1.94
SSN8YNL025C HMLALPHA2P0CY09 210 aa2.93□□□□□ -1.94
SSN8YNL025C MRP1P10662 321 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C KRS1P15180 591 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C VPS1P21576 704 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C MGR1P25573 417 aa2.93□□□□□ -1.94
SSN8YNL025C VMA5P31412 392 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C MSS51P32335 436 aa2.93□□□□□ -1.94
SSN8YNL025C VMA6P32366 345 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C NRP1P32770 719 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SSN8YNL025C IMP3P32899 183 aaPredicted RBP2.93□□□□□ -1.94
SSN8YNL025C UBC6P33296 250 aaPredicted RBP2.93□□□□□ -1.94
SSN8YNL025C AST1P35183 429 aa2.93□□□□□ -1.94
SSN8YNL025C RPL32P38061 130 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C RRN10P38204 145 aa2.93□□□□□ -1.94
SSN8YNL025C IMD2P38697 523 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C ARO9P38840 513 aaPredicted RBP2.93□□□□□ -1.94
SSN8YNL025C MIT1P40002 666 aa2.93□□□□□ -1.94
SSN8YNL025C PHM8P40025 321 aa2.93□□□□□ -1.94
SSN8YNL025C DSN1P40568 576 aa2.93□□□□□ -1.94
SSN8YNL025C HXT9P40885 567 aa2.93□□□□□ -1.94
SSN8YNL025C GAT1P43574 510 aa2.93□□□□□ -1.94
SSN8YNL025C ATG27P46989 271 aa2.93□□□□□ -1.94
SSN8YNL025C YJL118WP47022 219 aa2.93□□□□□ -1.94
SSN8YNL025C TAX4P47030 604 aa2.93□□□□□ -1.94
SSN8YNL025C YGL108CP53139 140 aa2.93□□□□□ -1.94
SSN8YNL025C ERG26P53199 349 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C YGR079WP53249 370 aa2.93□□□□□ -1.94
SSN8YNL025C NOP13P53883 403 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SSN8YNL025C VAC7P53950 1165 aa2.93□□□□□ -1.94
SSN8YNL025C ALG11P53954 548 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C HXT11P54862 567 aa2.93□□□□□ -1.94
SSN8YNL025C YMR160WQ03823 816 aa2.93□□□□□ -1.94
SSN8YNL025C MYO5Q04439 1219 aaKnown RBP2.93□□□□□ -1.94
SSN8YNL025C YDR222WQ04925 415 aa2.93□□□□□ -1.94
SSN8YNL025C SEC10Q06245 871 aa2.93□□□□□ -1.94
SSN8YNL025C ATG26Q06321 1198 aa2.93□□□□□ -1.94
SSN8YNL025C TLG2Q08144 397 aa2.93□□□□□ -1.94
SSN8YNL025C YPL216WQ08964 1102 aa2.93□□□□□ -1.94
SSN8YNL025C ATG9Q12142 997 aa2.93□□□□□ -1.94
SSN8YNL025C SIA1Q12212 622 aa2.93□□□□□ -1.94
SSN8YNL025C RRI1Q12468 440 aa2.93□□□□□ -1.94
SSN8YNL025C RAD9P14737 1309 aa2.93□□□□□ -1.94
SSN8YNL025C COX1P00401 534 aa2.92□□□□□ -1.94
SSN8YNL025C COX2P00410 251 aa2.92□□□□□ -1.94
SSN8YNL025C SCEIP03882 235 aa2.92□□□□□ -1.94
SSN8YNL025C ADE4P04046 510 aaKnown RBP2.92□□□□□ -1.94
SSN8YNL025C PET494P07390 489 aaPredicted RBP2.92□□□□□ -1.94
SSN8YNL025C NFT1P0CE68 1218 aa2.92□□□□□ -1.94
SSN8YNL025C FBA1P14540 359 aaKnown RBP2.92□□□□□ -1.94
SSN8YNL025C MET16P18408 261 aaPredicted RBP2.92□□□□□ -1.94
SSN8YNL025C SNF6P18888 332 aa2.92□□□□□ -1.94
SSN8YNL025C SRP54P20424 541 aaKnown RBP2.92□□□□□ -1.94
SSN8YNL025C RHB1P25378 209 aa2.92□□□□□ -1.94
SSN8YNL025C CIN8P27895 1000 aa2.92□□□□□ -1.94
SSN8YNL025C MSK1P32048 576 aa2.92□□□□□ -1.94
SSN8YNL025C SIN4P32259 974 aa2.92□□□□□ -1.94
SSN8YNL025C PRP18P33411 251 aaPredicted RBP2.92□□□□□ -1.94
SSN8YNL025C COS9P36034 407 aa2.92□□□□□ -1.94
SSN8YNL025C PRS4P38063 326 aaPredicted RBP2.92□□□□□ -1.94
SSN8YNL025C APL3P38065 1025 aa2.92□□□□□ -1.94
SSN8YNL025C FES1P38260 290 aa2.92□□□□□ -1.94
SSN8YNL025C IML3P38265 245 aa2.92□□□□□ -1.94
SSN8YNL025C PCA1P38360 1216 aa2.92□□□□□ -1.94
SSN8YNL025C HIS2P38635 335 aa2.92□□□□□ -1.94
SSN8YNL025C TDA11P38854 504 aa2.92□□□□□ -1.94
SSN8YNL025C MBB1P39534 108 aa2.92□□□□□ -1.94
SSN8YNL025C ECM10P39987 644 aa2.92□□□□□ -1.94
SSN8YNL025C YMR134WP40207 237 aa2.92□□□□□ -1.94
SSN8YNL025C GAT2P40209 560 aa2.92□□□□□ -1.94
SSN8YNL025C COX16P47081 118 aa2.92□□□□□ -1.94
SSN8YNL025C SLX9P53251 210 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms