RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	DBP3	P20447	523 aa	Known RBP	4.22	□□□□□ -1.73
RCM1	YNL022C	VPS3	P23643	1011 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	PHO91	P27514	894 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	KRE6	P32486	720 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	DOA4	P32571	926 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	VHC1	P38329	1120 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	TSC10	P38342	320 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	IMD2	P38697	523 aa	Known RBP	4.22	□□□□□ -1.73
RCM1	YNL022C	RIX1	P38883	763 aa	Predicted RBP	4.22	□□□□□ -1.73
RCM1	YNL022C	CCT2	P39076	527 aa	Known RBP	4.22	□□□□□ -1.73
RCM1	YNL022C	HOP2	P53187	214 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	ERG26	P53199	349 aa	Known RBP	4.22	□□□□□ -1.73
RCM1	YNL022C	ALG11	P53954	548 aa	Known RBP	4.22	□□□□□ -1.73
RCM1	YNL022C	PRO2	P54885	456 aa	Known RBP	4.22	□□□□□ -1.73
RCM1	YNL022C	FMP30	Q02883	468 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	HRD3	Q05787	833 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	RRT8	Q08219	342 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	Q0010	Q9ZZX9	128 aa		4.22	□□□□□ -1.73
RCM1	YNL022C	CBF1	P17106	351 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	YIM1	P28625	365 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	PPZ2	P33329	710 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	DRE2	P36152	348 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	TVP23	P38962	199 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	SER3	P40054	469 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	YMR134W	P40207	237 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	CHS6	P40955	746 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	YJL043W	P47053	257 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	AZR1	P50080	613 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	MND1	P53102	219 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	PDR16	P53860	351 aa	Known RBP	4.21	□□□□□ -1.74
RCM1	YNL022C	AQR1	P53943	586 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	MRS2	Q01926	470 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	YMR178W	Q03219	274 aa	Known RBP	4.21	□□□□□ -1.74
RCM1	YNL022C	MGR3	Q04472	501 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	ERV41	Q04651	352 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	IVY1	Q04934	453 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	KAP95	Q06142	861 aa	Known RBP	4.21	□□□□□ -1.74
RCM1	YNL022C	CYK3	Q07533	885 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	YOL159C	Q08300	171 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	EMP46	Q12396	444 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	ADF1	Q2V2Q1	113 aa		4.21	□□□□□ -1.74
RCM1	YNL022C	PEP5	P12868	1029 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	BUD5	P25300	642 aa	Predicted RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	SNT1	P25357	1226 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	YJU2	P28320	278 aa	Predicted RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	SEC1	P30619	724 aa	Known RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	HMX1	P32339	317 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	SRB2	P34162	210 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	PCA1	P38360	1216 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	ANS1	P38832	159 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	FAD1	P38913	306 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	EXO1	P39875	702 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	SMX2	P40204	77 aa	Known RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	INA22	P40576	216 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	SNZ3	P43545	298 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	TRF5	P48561	642 aa	Known RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	YGR126W	P53274	230 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	SNZ2	P53824	298 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	RSM23	Q01163	450 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	ELP3	Q02908	557 aa	Known RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	MZM1	Q03429	123 aa	Predicted RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	ARO80	Q04052	950 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	RPN9	Q04062	393 aa	Known RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	DCS1	Q06151	350 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	DIS3	Q08162	1001 aa	Known RBP	4.2	□□□□□ -1.74
RCM1	YNL022C	YDR018C	Q12185	396 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	SEY1	Q99287	776 aa		4.2	□□□□□ -1.74
RCM1	YNL022C	JIP3	O13555	125 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	CAR2	P07991	424 aa	Known RBP	4.19	□□□□□ -1.74
RCM1	YNL022C	MSS116	P15424	664 aa	Known RBP	4.19	□□□□□ -1.74
RCM1	YNL022C	SPS22	P25380	463 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	FRE1	P32791	686 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	MRPL4	P36517	319 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	DUG2	P38149	878 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	PEX32	P38292	413 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	SLX1	P38324	304 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	SWC5	P38326	303 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	YDR089W	P38966	869 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	DSE1	P40077	573 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	YIL054W	P40524	105 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	ALK1	P43633	760 aa	Known RBP	4.19	□□□□□ -1.74
RCM1	YNL022C	YJR054W	P47114	497 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	CGR1	P53188	120 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	YNL134C	P53912	376 aa	Known RBP	4.19	□□□□□ -1.74
RCM1	YNL022C	SLG1	P54867	378 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	RPL22B	P56628	122 aa	Known RBP	4.19	□□□□□ -1.74
RCM1	YNL022C	YVH1	Q02256	364 aa	Known RBP	4.19	□□□□□ -1.74
RCM1	YNL022C	EGD1	Q02642	157 aa	Known RBP	4.19	□□□□□ -1.74
RCM1	YNL022C	SMA1	Q02651	245 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	ABZ2	Q03266	374 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	YMR160W	Q03823	816 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	MRPL1	Q04599	285 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	PIG1	Q06216	648 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	VAM3	Q12241	283 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	YIL002W-A	Q3E7Z5	69 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	VPS13	Q07878	3144 aa		4.19	□□□□□ -1.74
RCM1	YNL022C	RHO2	P06781	192 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	CMD1	P06787	147 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	TUB1	P09733	447 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	KSS1	P14681	368 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 518.9 ms